RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 PRB4P10163 310 aaPredicted RBP9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 LOXL3P58215 753 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 FAM216BQ8N7L0 139 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 SMRP1Q8NCR6 262 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 RNF138Q8WVD3 245 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 CADP27708 2225 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 SRRM5B3KS81 715 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 SMKR1H3BMG3 65 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 IGHV1-2P23083 117 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 CRYBA4P53673 196 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 TNCP24821 2201 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 J3KRW8 73 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 TMEM78Q5T7P6 136 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 BEX4Q9NWD9 120 aaPredicted RBP9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 SIGLEC8Q9NYZ4 499 aa9.16□□□□□ -0.94
CRNKL1-204ENST00000490910 NPIPB6E9PJ23 425 aa9.15□□□□□ -0.94
CRNKL1-204ENST00000490910 ZNF815PA8K554 130 aa9.15□□□□□ -0.94
CRNKL1-204ENST00000490910 WFDC2Q14508 124 aa9.15□□□□□ -0.94
CRNKL1-204ENST00000490910 SAP25Q8TEE9 199 aa9.15□□□□□ -0.94
CRNKL1-204ENST00000490910 TNRC6AQ8NDV7 1962 aaKnown RBP9.15□□□□□ -0.95
CRNKL1-204ENST00000490910 LGALS3P17931 250 aaKnown RBP9.15□□□□□ -0.95
CRNKL1-204ENST00000490910 KRTAP27-1Q3LI81 207 aa9.15□□□□□ -0.95
CRNKL1-204ENST00000490910 RNFT1Q5M7Z0 435 aa9.15□□□□□ -0.95
CRNKL1-204ENST00000490910 ZNF562Q6V9R5 426 aa9.15□□□□□ -0.95
CRNKL1-204ENST00000490910 TRGV9Q99603 122 aa9.15□□□□□ -0.95
CRNKL1-204ENST00000490910 PROK2Q9HC23 129 aa9.15□□□□□ -0.95
CRNKL1-204ENST00000490910 TRAV17A0A0B4J275 112 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 IGKV1-16P04430 117 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 PRTN3P24158 256 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 LCNL1Q6ZST4 164 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 ZNF503-AS2A6NEH8 195 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 FAM104BQ5XKR9 115 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 CEND1Q8N111 149 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 C9orf172C9J069 976 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 P0C879 139 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 BOD1L2Q8IYS8 172 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 TMEM158Q8WZ71 300 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 FXYD5Q96DB9 178 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 RAB1BQ9H0U4 201 aa9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 RPUSD1Q9UJJ7 312 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-204ENST00000490910 TMEM213A2RRL7 107 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 EPOPA6NHQ4 379 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 MFAP4P55083 255 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 PPDPFLQ8WWR9 84 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 SLC25A39Q9BZJ4 359 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 FABP5P3A8MUU1 101 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 PRSS2P07478 247 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 PPIFP30405 207 aaKnown RBP9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 CLUHP3Q96NS8 147 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 ONECUT1Q9UBC0 465 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 DKK2Q9UBU2 259 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 SS18L2Q9UHA2 77 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 BPTFQ12830 3046 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 TRAV40A0A0B4J280 105 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 APOBEC3AP31941 199 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 TMEM170BQ5T4T1 132 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 AKAP6Q13023 2319 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 NPIPB5A8MRT5 1133 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 SRSF1Q07955 248 aaKnown RBP eCLIP9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 GDF5OSQ5U4N7 250 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 ASCL5Q7RTU5 278 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 LINC00312Q9Y6C7 94 aa9.13□□□□□ -0.95
CRNKL1-204ENST00000490910 TMEM8BA6NDV4 472 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 CGB1A6NKQ9 187 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 IGLV2-8P01709 118 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 PLNP26678 52 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 TMEM167AQ8TBQ9 72 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 NEU4Q8WWR8 484 aaPredicted RBP9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 ASCL2Q99929 193 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 IGKV1D-17A0A075B6S4 117 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 C15orf65H3BRN8 121 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 FXYD2P54710 66 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 DLX6P56179 175 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 FOXI2Q6ZQN5 318 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 Q6ZR03 302 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 KIAA1549Q9HCM3 1950 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 CRXO43186 299 aaPredicted RBP9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 CCL3L1P16619 93 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 GAGE5Q13069 117 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 GAGE6Q13070 117 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 C12orf74Q32Q52 190 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 TMEM190Q8WZ59 177 aa9.12□□□□□ -0.95
CRNKL1-204ENST00000490910 AHRRA9YTQ3 701 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 NDUFS7O75251 213 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 RNF125Q96EQ8 232 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 GVINP1Q7Z2Y8 2422 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 B5MCH6 92 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 LAGE3Q14657 143 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 PKDREJQ9NTG1 2253 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 IGLL5B9A064 214 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 GLRXP35754 106 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 TAL2Q16559 108 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 MRPL51Q4U2R6 128 aaKnown RBP9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 FBXL15Q9H469 300 aa9.11□□□□□ -0.95
CRNKL1-204ENST00000490910 SPTBN1Q01082 2364 aaKnown RBP9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 NKX2-8O15522 239 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 SH2D1AO60880 128 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 LTAP01374 205 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 ZNF134P52741 427 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 MORN5Q5VZ52 161 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms