RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SHANK2-AS3Q9BTD1 123 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 C20orf24Q9BUV8 137 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 SLC25A2Q9BXI2 301 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 SLC25A39Q9BZJ4 359 aaPredicted RBP5.01□□□□□ -1.61
SF3A3-208ENST00000489537 AAMDCQ9H7C9 122 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 OTORQ9NRC9 128 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 OSTCQ9NRP0 149 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 FBXL7Q9UJT9 491 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 TRAV41A0A0B4J266 112 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 TRBV6-1A0A0K0K1D8 114 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 WI2-2373I1.2A0A1W2PRP0 233 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 A0A1W2PS18 150 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 H3BRN7 92 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 ISLRO14498 428 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 IGKV1-17P01599 117 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 IGHG2P01859 326 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 TYMSP04818 313 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 S100A8P05109 93 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 CRYBA1P05813 215 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 RPL35P42766 123 aaKnown RBP5□□□□□ -1.61
SF3A3-208ENST00000489537 RPS10P46783 165 aaKnown RBP5□□□□□ -1.61
SF3A3-208ENST00000489537 GALR1P47211 349 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 ATP5G3P48201 142 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 MFAP2P55001 183 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 SUMO1P63165 101 aaKnown RBP5□□□□□ -1.61
SF3A3-208ENST00000489537 SSBP2P81877 361 aaPredicted RBP5□□□□□ -1.61
SF3A3-208ENST00000489537 ZNF90Q03938 601 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 ELOBQ15370 118 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 LDLRAD2Q5SZI1 272 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 LCE4AQ5TA78 99 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 CYB5R2Q6BCY4 276 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 FAM231DQ6ZW35 169 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 Q71RC1 249 aaPredicted RBP5□□□□□ -1.61
SF3A3-208ENST00000489537 CIARTQ8N365 385 aaPredicted RBP5□□□□□ -1.61
SF3A3-208ENST00000489537 FAM24BQ8N5W8 94 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 WFDC11Q8NEX6 87 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 ISOC2Q96AB3 205 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 SFRP2Q96HF1 295 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 FAM167A-AS1Q96KT0 104 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 ATG101Q9BSB4 218 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 ELOVL1Q9BW60 279 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 SRD5A3Q9H8P0 318 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 RABAC1Q9UI14 185 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 CSPG4Q6UVK1 2322 aa5□□□□□ -1.61
SF3A3-208ENST00000489537 FAM231BA6NCW3 169 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 PEX7O00628 323 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 ATP6V0E1O15342 81 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 GGCTO75223 188 aaKnown RBP4.99□□□□□ -1.61
SF3A3-208ENST00000489537 TGFAP01135 160 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 MT-ND6P03923 174 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 IL4P05112 153 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 SLC25A5P05141 298 aaKnown RBP4.99□□□□□ -1.61
SF3A3-208ENST00000489537 RIPPLY3P57055 190 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 SLC35B1P78383 322 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 RHOGP84095 191 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 TMEM183BQ1AE95 376 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 C15orf32Q32M92 178 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 WDR73Q6P4I2 378 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 RASL11AQ6T310 242 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 PATE2Q6UY27 113 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 DYNAPQ8N1N2 210 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 TMEM86BQ8N661 226 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 ZNF491Q8N8L2 437 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 ZNF502Q8TBZ5 544 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 C2CD4CQ8TF44 421 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 FXYD5Q96DB9 178 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 DAZAP1Q96EP5 407 aaKnown RBP4.99□□□□□ -1.61
SF3A3-208ENST00000489537 GRAMD2BQ96HH9 432 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 PYGO2Q9BRQ0 406 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 SLC50A1Q9BRV3 221 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 EPDR1Q9UM22 224 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 ZFP30Q9Y2G7 519 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 KLF12Q9Y4X4 402 aa4.99□□□□□ -1.61
SF3A3-208ENST00000489537 YTHDF2Q9Y5A9 579 aaKnown RBP4.99□□□□□ -1.61
SF3A3-208ENST00000489537 SOX21Q9Y651 276 aaPredicted RBP4.99□□□□□ -1.61
SF3A3-208ENST00000489537 TLN2Q9Y4G6 2542 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 SVEP1Q4LDE5 3571 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 FBN1P35555 2871 aaKnown RBP4.98□□□□□ -1.61
SF3A3-208ENST00000489537 TRBV19A0A075B6N1 114 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 A0A0U1RQK1 487 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 XKRY2A2RUG3 117 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 PGPA6NDG6 321 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 A6NDX4 124 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 ZNF98A6NK75 572 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 H3BUX3 64 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 OR2J3O76001 311 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 GCGP01275 180 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 GP9P14770 177 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 NPPCP23582 126 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 GATA2P23769 480 aaPredicted RBP4.98□□□□□ -1.61
SF3A3-208ENST00000489537 CRYBB3P26998 211 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 MYCNOSP40205 109 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 DLX1P56177 255 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 ERVFC1-1P60608 527 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 ECSCRQ19T08 205 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 RPEL1Q2QD12 228 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 CT83Q5H943 113 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 SAPCD1Q5SSQ6 148 aa4.98□□□□□ -1.61
SF3A3-208ENST00000489537 SPATA31B1PQ5VZV4 182 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms