RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-213	ENST00000489003	DEFB131A	P59861	70 aa		11.25	□□□□□ -0.61
FDPS-213	ENST00000489003	ZNF124	Q15973	351 aa		11.25	□□□□□ -0.61
FDPS-213	ENST00000489003	C10orf113	Q5VZT2	155 aa		11.25	□□□□□ -0.61
FDPS-213	ENST00000489003	LINC00305	Q7Z4B0	112 aa		11.25	□□□□□ -0.61
FDPS-213	ENST00000489003	APRG1	Q8IVJ8	170 aa		11.25	□□□□□ -0.61
FDPS-213	ENST00000489003	SCGB1C1	Q8TD33	95 aa		11.25	□□□□□ -0.61
FDPS-213	ENST00000489003	RSG1	Q9BU20	258 aa		11.25	□□□□□ -0.61
FDPS-213	ENST00000489003	S100A7A	Q86SG5	101 aa		11.24	□□□□□ -0.61
FDPS-213	ENST00000489003	ZNF709	Q8N972	641 aa		11.24	□□□□□ -0.61
FDPS-213	ENST00000489003	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.24	□□□□□ -0.61
FDPS-213	ENST00000489003	OR1L4	Q8NGR5	311 aa		11.24	□□□□□ -0.61
FDPS-213	ENST00000489003	SEPSECS	Q9HD40	501 aa	Known RBP	11.24	□□□□□ -0.61
FDPS-213	ENST00000489003	RFNG	Q9Y644	331 aa		11.24	□□□□□ -0.61
FDPS-213	ENST00000489003	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.24	□□□□□ -0.61
FDPS-213	ENST00000489003	TRAV5	A0A0B4J249	113 aa		11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	RNF222	A6NCQ9	220 aa		11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	GALR1	P47211	349 aa		11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	GCSAML	Q5JQS6	135 aa		11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	MORN5	Q5VZ52	161 aa		11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	GATAD1	Q8WUU5	269 aa		11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	GPR82	Q96P67	336 aa		11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	PFDN5	Q99471	154 aa		11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	AGRN	O00468	2067 aa		11.23	□□□□□ -0.61
FDPS-213	ENST00000489003	C17orf112	F2Z3M2	114 aa		11.22	□□□□□ -0.61
FDPS-213	ENST00000489003	SOCS3	O14543	225 aa		11.22	□□□□□ -0.61
FDPS-213	ENST00000489003	MRPS12	O15235	138 aa	Known RBP	11.22	□□□□□ -0.61
FDPS-213	ENST00000489003	ZNF688	P0C7X2	276 aa		11.22	□□□□□ -0.61
FDPS-213	ENST00000489003	RPL7	P18124	248 aa	Known RBP	11.22	□□□□□ -0.61
FDPS-213	ENST00000489003	HAGH	Q16775	308 aa		11.22	□□□□□ -0.61
FDPS-213	ENST00000489003	OR11H4	Q8NGC9	324 aa		11.22	□□□□□ -0.61
FDPS-213	ENST00000489003	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.21	□□□□□ -0.61
FDPS-213	ENST00000489003	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.21	□□□□□ -0.61
FDPS-213	ENST00000489003	ST6GAL2	Q96JF0	529 aa		11.21	□□□□□ -0.61
FDPS-213	ENST00000489003	RNF24	Q9Y225	148 aa		11.21	□□□□□ -0.61
FDPS-213	ENST00000489003	ARPC5	O15511	151 aa		11.2	□□□□□ -0.62
FDPS-213	ENST00000489003	NHLRC4	P0CG21	123 aa	Predicted RBP	11.2	□□□□□ -0.62
FDPS-213	ENST00000489003	ID1	P41134	155 aa		11.2	□□□□□ -0.62
FDPS-213	ENST00000489003	PSMG4	Q5JS54	123 aa		11.2	□□□□□ -0.62
FDPS-213	ENST00000489003	LINC00052	Q96N35	136 aa		11.2	□□□□□ -0.62
FDPS-213	ENST00000489003	MFF	Q9GZY8	342 aa		11.2	□□□□□ -0.62
FDPS-213	ENST00000489003	KCNIP2	Q9NS61	270 aa		11.2	□□□□□ -0.62
FDPS-213	ENST00000489003	TG	P01266	2768 aa		11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	HMSD	A8MTL9	139 aa		11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	SNRPC	P09234	159 aa	Known RBP	11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	ATF4	P18848	351 aa	Predicted RBP	11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	MEOX2	P50222	304 aa		11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	SNRPD3	P62318	126 aa	Known RBP	11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	ZNF266	Q14584	549 aa		11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	FFAR4	Q5NUL3	377 aa		11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	FAM78B	Q5VT40	261 aa		11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	SPATA31B1P	Q5VZV4	182 aa		11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	TIMM9	Q9Y5J7	89 aa		11.19	□□□□□ -0.62
FDPS-213	ENST00000489003	hCG_2014768	A0A024R1R8	64 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003		A0A087X0K7	114 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	TRAV8-2	A0A0B4J237	113 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	KNCN	A6PVL3	124 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	ISLR	O14498	428 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	RPL35A	P18077	110 aa	Known RBP	11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	PSMB3	P49720	205 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	IGFL4	Q6B9Z1	124 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	RPL7L1	Q6DKI1	246 aa	Known RBP	11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	MIR17HG	Q75NE6	70 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	BPIFA4P	Q86YQ2	179 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	HSD17B11	Q8NBQ5	300 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	C16orf92	Q96LL3	132 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	C20orf173	Q96LM9	149 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	TM2D3	Q9BRN9	247 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003	CYTL1	Q9NRR1	136 aa		11.18	□□□□□ -0.62
FDPS-213	ENST00000489003		A0A1B0GVG6	124 aa		11.17	□□□□□ -0.62
FDPS-213	ENST00000489003	ATP6V0C	P27449	155 aa		11.17	□□□□□ -0.62
FDPS-213	ENST00000489003	DEFB1	P60022	68 aa		11.17	□□□□□ -0.62
FDPS-213	ENST00000489003		H3BQ15	152 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003		H3BTX0	84 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	TAAR5	O14804	337 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	IGLC2	P0DOY2	106 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	CXCL2	P19875	107 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	ACTL10	Q5JWF8	245 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	SAMD13	Q5VXD3	122 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	TCTE3	Q8IZS6	198 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	KCNRG	Q8N5I3	272 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	FAM167A-AS1	Q96KT0	104 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	SLC25A2	Q9BXI2	301 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	HRH4	Q9H3N8	390 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	TMEM14C	Q9P0S9	112 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	FUT9	Q9Y231	359 aa		11.16	□□□□□ -0.62
FDPS-213	ENST00000489003	COL7A1	Q02388	2944 aa		11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	HLA-DMB	P28068	263 aa		11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	ZNF345	Q14585	488 aa		11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	GDF5OS	Q5U4N7	250 aa		11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	STH	Q8IWL8	128 aa		11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	OR2G3	Q8NGZ4	309 aa		11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	SAT2	Q96F10	170 aa	Predicted RBP	11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	PSMG3	Q9BT73	122 aa	Predicted RBP	11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	MRPL32	Q9BYC8	188 aa	Known RBP	11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	CSTL1	Q9H114	145 aa		11.15	□□□□□ -0.62
FDPS-213	ENST00000489003	ZNF586	Q9NXT0	402 aa		11.15	□□□□□ -0.62
FDPS-213	ENST00000489003		A0A0D9SG52	128 aa		11.14	□□□□□ -0.63
FDPS-213	ENST00000489003	KIR2DL5B	A0A0G2JN68	375 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms