RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 MDFICQ9P1T7 246 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 METTL1Q9UBP6 276 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 PCNX3Q9H6A9 2034 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 MYH10P35580 1976 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 CHD5Q8TDI0 1954 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 OTOFQ9HC10 1997 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 MBD5Q9P267 1494 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 H7C2G1 150 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 K7EM74 188 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 PSCAO43653 123 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 CPSF4O95639 269 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 FABP4P15090 132 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 SUPT4H1P63272 117 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 RELAQ04206 551 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 HSD52Q0P140 79 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 KISS1Q15726 138 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 MAPK1IP1LQ8NDC0 245 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 SLC35B3Q9H1N7 401 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 BCL2L10Q9HD36 194 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 FAIMQ9NVQ4 179 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 NOP16Q9Y3C1 178 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 TPRKBQ9Y3C4 175 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 LY96Q9Y6Y9 160 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 TRIP11Q15643 1979 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 PLXNB3Q9ULL4 1909 aa3.3□□□□□ -1.88
R3HDM1-216ENST00000483065 NISCHQ9Y2I1 1504 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 CCL25O15444 150 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 SYNGR2O43760 224 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 ZNF861PO60384 105 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 HYPMO75409 117 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 CD2P06729 351 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 SNRPD3P62318 126 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 CDK5R1Q15078 307 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 ZNF79Q15937 498 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 C14orf177Q52M58 125 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 SPANXN5Q5MJ07 72 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 SLC35E3Q7Z769 313 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 SVBPQ8N300 66 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 LINC00471Q8N535 108 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 WFDC11Q8NEX6 87 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 CHCHD1Q96BP2 118 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 DPH3Q96FX2 82 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 ZC2HC1AQ96GY0 325 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 ZNF443Q9Y2A4 671 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 V9GYS6 101 aa3.29□□□□□ -1.88
R3HDM1-216ENST00000483065 A2ML1A8K2U0 1454 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 C17orf98A8MV24 154 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 PCBD1P61457 104 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 ZNF90Q03938 601 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 Q56UQ5 140 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 PATE2Q6UY27 113 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 GKN2Q86XP6 184 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 LINC00311Q8N616 119 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 PSMF1Q92530 271 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 S4R3C0 116 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 RIMBP3CA6NJZ7 1639 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 RIMBP3BA6NNM3 1639 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 TRPM1Q7Z4N2 1603 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 LTBP4Q8N2S1 1624 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 RIMBP3Q9UFD9 1639 aa3.28□□□□□ -1.88
R3HDM1-216ENST00000483065 PIKFYVEQ9Y2I7 2098 aa3.28□□□□□ -1.89
R3HDM1-216ENST00000483065 PRDM2Q13029 1718 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 HCFC1P51610 2035 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 TET2Q6N021 2002 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 NUP210Q8TEM1 1887 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 ZNF106Q9H2Y7 1883 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 A0A087WYN8 130 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 PIGBOS1A0A0B4J2F0 54 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 OR51F1A6NGY5 319 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 APOC4-APOC2K7ER74 178 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 GNRH2O43555 120 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 APOC2P02655 101 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 DNAH10OSP0CZ25 163 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 CLLU1Q5K131 121 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 NCMAPQ5T1S8 102 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 OR5AS1Q8N127 324 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 OR5AK2Q8NH90 309 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 AQP3Q92482 292 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 C14orf132Q9NPU4 83 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 RAPGEF2Q9Y4G8 1499 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 LTBP1Q14766 1721 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 RGS12O14924 1447 aa3.27□□□□□ -1.89
R3HDM1-216ENST00000483065 TSPOAP1O95153 1857 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 SCN2AQ99250 2005 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 IGLV3-12A0A075B6K2 115 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 A0A1B0GU33 70 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 LOC100130705A0A1B0GUX0 176 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 ZNF736B4DX44 427 aaPredicted RBP3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 PROSCO94903 275 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 TRACP01848 142 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 CTSDP07339 412 aaPredicted RBP3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 CD14P08571 375 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 CCL4P13236 92 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 CKS2P33552 79 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 BLCAPP62952 87 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 MRGPRG-AS1Q2M3A8 158 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 MRPL54Q6P161 138 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 C3orf56Q8N813 242 aa3.26□□□□□ -1.89
R3HDM1-216ENST00000483065 Q8NDZ9 215 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms