RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PSG9Q00887 426 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 PRSS57Q6UWY2 283 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 PNKDQ8N490 385 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 PRSS1P07477 247 aa10.21□□□□□ -0.77
VPS52-218ENST00000482399 CACNG7P62955 275 aa10.21□□□□□ -0.77
VPS52-218ENST00000482399 AARDQ4LEZ3 155 aa10.21□□□□□ -0.77
VPS52-218ENST00000482399 SMIM15Q7Z3B0 74 aa10.21□□□□□ -0.77
VPS52-218ENST00000482399 CST9LQ9H4G1 147 aa10.21□□□□□ -0.77
VPS52-218ENST00000482399 CGB1A6NKQ9 187 aa10.21□□□□□ -0.78
VPS52-218ENST00000482399 NCBP2LA6PVI3 153 aaKnown RBP10.21□□□□□ -0.78
VPS52-218ENST00000482399 C22orf46C9J442 243 aa10.21□□□□□ -0.78
VPS52-218ENST00000482399 PPIFP30405 207 aaKnown RBP10.21□□□□□ -0.78
VPS52-218ENST00000482399 ST20Q9HBF5 79 aa10.21□□□□□ -0.78
VPS52-218ENST00000482399 PCSK5Q92824 1860 aa10.21□□□□□ -0.78
VPS52-218ENST00000482399 GAGE12BA1L429 117 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 K7ERU9 68 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 ORM1P02763 201 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 GCSHP23434 173 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 SAPCD1Q5SSQ6 148 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 OR10AG1Q8NH19 301 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 MEGF9Q9H1U4 602 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 DKK4Q9UBT3 224 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 LOC105371242A0A075B767 164 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 J3KRW8 73 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 IFI27P40305 119 aaPredicted RBP10.2□□□□□ -0.78
VPS52-218ENST00000482399 GUSBP1Q15486 140 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 TWIST1Q15672 202 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 BVES-AS1Q5T3Y7 98 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 BSPH1Q075Z2 132 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 DSCAML1Q8TD84 2053 aa10.2□□□□□ -0.78
VPS52-218ENST00000482399 GNG7O60262 68 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 IGHG3P01860 377 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 CKS2P33552 79 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 AAMDCQ9H7C9 122 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 TMEM213A2RRL7 107 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 D6R8Y8 96 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 RBX1P62877 108 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 TMEM186Q96B77 213 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 MBD6Q96DN6 1003 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 FMC1Q96HJ9 113 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 GUCD1Q96NT3 240 aa10.19□□□□□ -0.78
VPS52-218ENST00000482399 TRAV30A0A087WSZ9 112 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 C17orf100A8MU93 164 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 TM4SF5O14894 197 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 OCIAD2Q56VL3 154 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 TMEM167AQ8TBQ9 72 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 TRAV8-6A0A0B4J262 113 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 IGHV2-70DA0A0C4DH43 119 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 C16orf97H3BN30 126 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 PRRG2O14669 202 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 FTH1P19P0C7X4 201 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 CGB3P0DN86 165 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 CGB7P0DN87 165 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 ATP5L2Q7Z4Y8 100 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 Q8TAT8 98 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 PEF1Q9UBV8 284 aaKnown RBP10.18□□□□□ -0.78
VPS52-218ENST00000482399 SMG1Q96Q15 3661 aaKnown RBP10.18□□□□□ -0.78
VPS52-218ENST00000482399 SAP30O75446 220 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 FAM106CPP0CH98 169 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 FAM106AQ4KMX7 169 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 SEM1Q6ZVN7 128 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 FAM231DQ6ZW35 169 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 SLC25A39Q9BZJ4 359 aaPredicted RBP10.18□□□□□ -0.78
VPS52-218ENST00000482399 TMEM133Q9H2Q1 129 aa10.18□□□□□ -0.78
VPS52-218ENST00000482399 MAP1AP78559 2803 aaPredicted RBP10.18□□□□□ -0.78
VPS52-218ENST00000482399 IGHV3-49A0A0A0MS15 119 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 IGHV3-66A0A0C4DH42 116 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 TMEM189A5PLL7 270 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 OR2J3O76001 311 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 LHBP01229 141 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 C16orf54Q6UWD8 224 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 PRELID3AQ96N28 172 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 IGKV1D-37A0A075B6S9 117 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 FNDC10F2Z333 226 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 IGF2RP11717 2491 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 MC5RP33032 325 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 POU2AF1Q16633 256 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 TMEM97Q5BJF2 176 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 C1orf185Q5T7R7 199 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 RASL11AQ6T310 242 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 OR5AN1Q8NGI8 311 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 SCNM1Q9BWG6 230 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 PSG8Q9UQ74 426 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 DMXL1Q9Y485 3027 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 FAM231BA6NCW3 169 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 K7EMI3 77 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 M0R296 226 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 ATP5IP56385 69 aaPredicted RBP10.17□□□□□ -0.78
VPS52-218ENST00000482399 Q86TA4 180 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 CHCHD1Q96BP2 118 aaKnown RBP10.17□□□□□ -0.78
VPS52-218ENST00000482399 URB1-AS1Q96HZ7 61 aa10.17□□□□□ -0.78
VPS52-218ENST00000482399 NPIPB5A8MRT5 1133 aa10.16□□□□□ -0.78
VPS52-218ENST00000482399 LY6HO94772 140 aa10.16□□□□□ -0.78
VPS52-218ENST00000482399 TOMM40O96008 361 aa10.16□□□□□ -0.78
VPS52-218ENST00000482399 EVI2AP22794 236 aa10.16□□□□□ -0.78
VPS52-218ENST00000482399 PPP1R27Q86WC6 154 aa10.16□□□□□ -0.78
VPS52-218ENST00000482399 C8orf46Q8TAG6 207 aa10.16□□□□□ -0.78
VPS52-218ENST00000482399 IGKV2-40A0A087WW87 121 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms