RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 H3BQ15 152 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 PRB2P02812 416 aaPredicted RBP7.73□□□□□ -1.17
CASC3-204ENST00000474190 IGLC2P0DOY2 106 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 GP9P14770 177 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 RAB31Q13636 194 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 FFAR4Q5NUL3 377 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 SCGB1C1Q8TD33 95 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 GATAD1Q8WUU5 269 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 MS4A6AQ9H2W1 248 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 RPRMQ9NS64 109 aa7.73□□□□□ -1.17
CASC3-204ENST00000474190 K7EQG2 157 aa7.72□□□□□ -1.17
CASC3-204ENST00000474190 CD7P09564 240 aa7.72□□□□□ -1.17
CASC3-204ENST00000474190 ODF3L2Q3SX64 289 aa7.72□□□□□ -1.17
CASC3-204ENST00000474190 C10orf113Q5VZT2 155 aa7.72□□□□□ -1.17
CASC3-204ENST00000474190 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.72□□□□□ -1.17
CASC3-204ENST00000474190 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
CASC3-204ENST00000474190 BORCS7-ASMTA0A0B4J1R7 106 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 A0A1W2PS18 150 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 C17orf112F2Z3M2 114 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 K7EIL1 84 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 COX7A2P2O60397 106 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 NDUFB4O95168 129 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 M6PRP20645 277 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 FHITP49789 147 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 SERF2P84101 59 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 SIGLEC15Q6ZMC9 328 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 Q6ZRG5 221 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 BAP18Q8IXM2 172 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 GBGT1Q8N5D6 347 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 DYNLRB2Q8TF09 96 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 GNPNAT1Q96EK6 184 aaPredicted RBP7.71□□□□□ -1.18
CASC3-204ENST00000474190 SAT2Q96F10 170 aaPredicted RBP7.71□□□□□ -1.18
CASC3-204ENST00000474190 C20orf173Q96LM9 149 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 PRR25Q96S07 402 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 SPAG8Q99932 426 aaPredicted RBP7.71□□□□□ -1.18
CASC3-204ENST00000474190 ZNF471Q9BX82 626 aaPredicted RBP7.71□□□□□ -1.18
CASC3-204ENST00000474190 WFDC10AQ9H1F0 79 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 AURKAIP1Q9NWT8 199 aaPredicted RBP7.71□□□□□ -1.18
CASC3-204ENST00000474190 TMEM14CQ9P0S9 112 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 FUT9Q9Y231 359 aa7.71□□□□□ -1.18
CASC3-204ENST00000474190 A0A087X0K7 114 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 TRAV2A0A0B4J234 112 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 KANTRA0A1W2PQU2 76 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 SLC17A3O00476 420 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 PFDN1O60925 122 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 SNRPCP09234 159 aaKnown RBP7.7□□□□□ -1.18
CASC3-204ENST00000474190 SEC11BP0C7V7 166 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 PYYP10082 97 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 FAM78BQ5VT40 261 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 LCN12Q6JVE5 192 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 ZNF709Q8N972 641 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 OR1L4Q8NGR5 311 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 SUN5Q8TC36 379 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 FXYD5Q96DB9 178 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 PFDN5Q99471 154 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 GPR61Q9BZJ8 451 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 SLC25A22Q9H936 323 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 ZNF586Q9NXT0 402 aa7.7□□□□□ -1.18
CASC3-204ENST00000474190 IGKV3-7A0A075B6H7 116 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 H3BTX0 84 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 DEFB1P60022 68 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 ZNF124Q15973 351 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 TMEM41BQ5BJD5 291 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 IGFL4Q6B9Z1 124 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 SLC51BQ86UW2 128 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 OR8I2Q8N0Y5 310 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 OR10G4Q8NGN3 311 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 OR10G9Q8NGN4 311 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 OR10G7Q8NGN6 311 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 TMED6Q8WW62 240 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 MRPL32Q9BYC8 188 aaKnown RBP7.69□□□□□ -1.18
CASC3-204ENST00000474190 TMEM231Q9H6L2 316 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 NRN1Q9NPD7 142 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 KCNIP2Q9NS61 270 aa7.69□□□□□ -1.18
CASC3-204ENST00000474190 HELTA6NFD8 242 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 CD5P06127 495 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 STAG3L2P0CL84 134 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 STAG3L3P0CL85 134 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 TPT1P13693 172 aaKnown RBP7.68□□□□□ -1.18
CASC3-204ENST00000474190 HLA-DMBP28068 263 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 TFPI2P48307 235 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 ACOT6Q3I5F7 207 aaPredicted RBP7.68□□□□□ -1.18
CASC3-204ENST00000474190 FAM122CQ6P4D5 195 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 LINC00322Q6ZN03 302 aaPredicted RBP7.68□□□□□ -1.18
CASC3-204ENST00000474190 RAB24Q969Q5 203 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 GPR82Q96P67 336 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 HRH4Q9H3N8 390 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 MAP6D1Q9H9H5 199 aa7.68□□□□□ -1.18
CASC3-204ENST00000474190 TRBV19A0A075B6N1 114 aa7.67□□□□□ -1.18
CASC3-204ENST00000474190 HMGB3O15347 200 aaKnown RBP7.67□□□□□ -1.18
CASC3-204ENST00000474190 PRB4P10163 310 aaPredicted RBP7.67□□□□□ -1.18
CASC3-204ENST00000474190 RPL7P18124 248 aaKnown RBP7.67□□□□□ -1.18
CASC3-204ENST00000474190 BMI1P35226 326 aa7.67□□□□□ -1.18
CASC3-204ENST00000474190 GUCA2BQ16661 112 aa7.67□□□□□ -1.18
CASC3-204ENST00000474190 FAM74A1Q5RGS3 127 aa7.67□□□□□ -1.18
CASC3-204ENST00000474190 RBPMS2Q6ZRY4 209 aaKnown RBP7.67□□□□□ -1.18
CASC3-204ENST00000474190 WFDC3Q8IUB2 231 aa7.67□□□□□ -1.18
CASC3-204ENST00000474190 STXBP6Q8NFX7 210 aa7.67□□□□□ -1.18
CASC3-204ENST00000474190 PPP1R14BQ96C90 147 aa7.67□□□□□ -1.18
CASC3-204ENST00000474190 GRAMD2BQ96HH9 432 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms