RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 PAX9P55771 341 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 FXYD7P58549 80 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 ZNF546Q86UE3 836 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 SCRT1Q9BWW7 348 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 SLC25A39Q9BZJ4 359 aaPredicted RBP8.43□□□□□ -1.06
CPNE1-222ENST00000473373 BATF3Q9NR55 127 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 PPP1R14DQ9NXH3 145 aa8.43□□□□□ -1.06
CPNE1-222ENST00000473373 FAM24AA6NFZ4 105 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 FNDC10F2Z333 226 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 RPL7P18124 248 aaKnown RBP8.42□□□□□ -1.06
CPNE1-222ENST00000473373 C4BPBP20851 252 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 HBG1P69891 147 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 HBG2P69892 147 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 BAXQ07812 192 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 TMEM182Q6ZP80 229 aaPredicted RBP8.42□□□□□ -1.06
CPNE1-222ENST00000473373 FOXI2Q6ZQN5 318 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 Q6ZRG5 221 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 UHRF2Q96PU4 802 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
CPNE1-222ENST00000473373 CSMD3Q7Z407 3707 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 UBE2L5PA0A1B0GUS4 154 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 PMS2P5A8MQ11 134 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 INMT-MINDY4F8WBC2 141 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 H3BMM0 161 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 H3BRN7 92 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 AGPAT2O15120 278 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 SSNA1O43805 119 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 LY6G6CO95867 125 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 MIFP14174 115 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 DEFB1P60022 68 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 NANOS2P60321 138 aaKnown RBP8.41□□□□□ -1.06
CPNE1-222ENST00000473373 EWSR1Q01844 656 aaKnown RBP eCLIP8.41□□□□□ -1.06
CPNE1-222ENST00000473373 RAB32Q13637 225 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 LRRC37A5PQ49AS3 106 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 CEMP1Q6PRD7 247 aaPredicted RBP8.41□□□□□ -1.06
CPNE1-222ENST00000473373 ZNF738Q8NE65 137 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 PHLDA1Q8WV24 401 aaPredicted RBP8.41□□□□□ -1.06
CPNE1-222ENST00000473373 GGACTQ9BVM4 153 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 ARV1Q9H2C2 271 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 C11orf68Q9H3H3 251 aaKnown RBP8.41□□□□□ -1.06
CPNE1-222ENST00000473373 SAV1Q9H4B6 383 aaPredicted RBP8.41□□□□□ -1.06
CPNE1-222ENST00000473373 UQCC1Q9NVA1 299 aa8.41□□□□□ -1.06
CPNE1-222ENST00000473373 IGHV4-28A0A0C4DH34 117 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 PRAF2O60831 178 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 DEDDO75618 318 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 CAMLGP49069 296 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 PXDC1Q5TGL8 231 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 GDF5OSQ5U4N7 250 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 SPATA31B1PQ5VZV4 182 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 NRARPQ7Z6K4 114 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 SHANK2-AS3Q9BTD1 123 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 TMEM208Q9BTX3 173 aa8.4□□□□□ -1.06
CPNE1-222ENST00000473373 F6UB75 175 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 SIX6O95475 246 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 S100A11P31949 105 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 SULT1A1P50225 295 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 EMP1P54849 157 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 RHOBP62745 196 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 PSG9Q00887 426 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 ARL16Q0P5N6 197 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 FAM78BQ5VT40 261 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 C10orf113Q5VZT2 155 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 LINC00305Q7Z4B0 112 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 RNF182Q8N6D2 247 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 OR1L4Q8NGR5 311 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 SLC25A31Q9H0C2 315 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 LYRM2Q9NU23 88 aaPredicted RBP8.39□□□□□ -1.07
CPNE1-222ENST00000473373 GOLT1BQ9Y3E0 138 aa8.39□□□□□ -1.07
CPNE1-222ENST00000473373 DUSP14O95147 198 aaKnown RBP8.38□□□□□ -1.07
CPNE1-222ENST00000473373 FGF7P21781 194 aa8.38□□□□□ -1.07
CPNE1-222ENST00000473373 PLP1P60201 277 aa8.38□□□□□ -1.07
CPNE1-222ENST00000473373 CYCSP99999 105 aaKnown RBP8.38□□□□□ -1.07
CPNE1-222ENST00000473373 IGFL4Q6B9Z1 124 aa8.38□□□□□ -1.07
CPNE1-222ENST00000473373 BPIFA4PQ86YQ2 179 aa8.38□□□□□ -1.07
CPNE1-222ENST00000473373 PFDN5Q99471 154 aa8.38□□□□□ -1.07
CPNE1-222ENST00000473373 MGST2Q99735 147 aa8.38□□□□□ -1.07
CPNE1-222ENST00000473373 SLC35B3Q9H1N7 401 aa8.38□□□□□ -1.07
CPNE1-222ENST00000473373 ELOA3CA0A087WX78 387 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-222ENST00000473373 A0A0J9YX75 114 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 IGSF23A1L1A6 192 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 E5RGE8 158 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 SOCS3O14543 225 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 GIG44P09565 113 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-222ENST00000473373 PET100P0DJ07 73 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 HIST1H1AQ02539 215 aaPredicted RBP8.37□□□□□ -1.07
CPNE1-222ENST00000473373 ATP6V1FQ16864 119 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 MIC13Q5XKP0 118 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 TMEM252Q8N6L7 170 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 Q8NAQ8 132 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 C2CD4CQ8TF44 421 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 C20orf173Q96LM9 149 aa8.37□□□□□ -1.07
CPNE1-222ENST00000473373 PLECQ15149 4684 aaKnown RBP8.36□□□□□ -1.07
CPNE1-222ENST00000473373 ZNF705EA8MWA4 302 aaPredicted RBP8.36□□□□□ -1.07
CPNE1-222ENST00000473373 IGLL5B9A064 214 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 C11orf94C9JXX5 98 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 HBE1P02100 147 aa8.36□□□□□ -1.07
CPNE1-222ENST00000473373 SNRPCP09234 159 aaKnown RBP8.36□□□□□ -1.07
CPNE1-222ENST00000473373 ZNF705DP0CH99 300 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms