RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-208	ENST00000471226	OXA1L	Q15070	435 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	FCN2	Q15485	313 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	PSMG4	Q5JS54	123 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	S100A7A	Q86SG5	101 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	TRPT1	Q86TN4	253 aa	Known RBP	11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	OR11H7	Q8NGC8	314 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	UHRF2	Q96PU4	802 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	MED28	Q9H204	178 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	KNCN	A6PVL3	124 aa		11.14	□□□□□ -0.63
ABCF3-208	ENST00000471226	ID1	P41134	155 aa		11.14	□□□□□ -0.63
ABCF3-208	ENST00000471226	PSMB3	P49720	205 aa		11.14	□□□□□ -0.63
ABCF3-208	ENST00000471226	MEOX2	P50222	304 aa		11.14	□□□□□ -0.63
ABCF3-208	ENST00000471226	MIC13	Q5XKP0	118 aa		11.14	□□□□□ -0.63
ABCF3-208	ENST00000471226	STH	Q8IWL8	128 aa		11.14	□□□□□ -0.63
ABCF3-208	ENST00000471226	TMEM37	Q8WXS4	190 aa		11.14	□□□□□ -0.63
ABCF3-208	ENST00000471226	RNF183	Q96D59	192 aa		11.14	□□□□□ -0.63
ABCF3-208	ENST00000471226	RSG1	Q9BU20	258 aa		11.14	□□□□□ -0.63
ABCF3-208	ENST00000471226	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	ISLR	O14498	428 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	MRPS12	O15235	138 aa	Known RBP	11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	SPRY2	O43597	315 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	MPDU1	O75352	247 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	RPL7	P18124	248 aa	Known RBP	11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	FGF7	P21781	194 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	DEFB135	Q30KP9	77 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	ACTL10	Q5JWF8	245 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	SAMD13	Q5VXD3	122 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226		Q6ZRG5	221 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	LINC00305	Q7Z4B0	112 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	MBD2	Q9UBB5	411 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	RNF24	Q9Y225	148 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	DNAH7	Q8WXX0	4024 aa		11.13	□□□□□ -0.63
ABCF3-208	ENST00000471226	COX7A2P2	O60397	106 aa		11.12	□□□□□ -0.63
ABCF3-208	ENST00000471226	RPL12	P30050	165 aa	Known RBP	11.12	□□□□□ -0.63
ABCF3-208	ENST00000471226	NPCDR1	Q9BY65	106 aa		11.12	□□□□□ -0.63
ABCF3-208	ENST00000471226	DNAJC4	Q9NNZ3	241 aa		11.12	□□□□□ -0.63
ABCF3-208	ENST00000471226	SLC39A9	Q9NUM3	307 aa		11.12	□□□□□ -0.63
ABCF3-208	ENST00000471226	HSPB11	Q9Y547	144 aa		11.12	□□□□□ -0.63
ABCF3-208	ENST00000471226		A0A087X0K7	114 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	GIG44	P09565	113 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	SPP1	P10451	314 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	B2M	P61769	119 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	CLINT1	Q14677	625 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	C10orf113	Q5VZT2	155 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	MORN3	Q6PF18	240 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	OR1L4	Q8NGR5	311 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	C16orf92	Q96LL3	132 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	LINC00052	Q96N35	136 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	PFDN5	Q99471	154 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	WDR61	Q9GZS3	305 aa	Known RBP	11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226	PXMP4	Q9Y6I8	212 aa		11.11	□□□□□ -0.63
ABCF3-208	ENST00000471226		H3BMM0	161 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	CA1	P00915	261 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	GIP	P09681	153 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	HLA-DRB4	P13762	266 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	ATF4	P18848	351 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	DEFB1	P60022	68 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	GDF5OS	Q5U4N7	250 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	MORN5	Q5VZ52	161 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	FOXI2	Q6ZQN5	318 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	MUC7	Q8TAX7	377 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	THAP6	Q8TBB0	222 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	GATAD1	Q8WUU5	269 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	ASB13	Q8WXK3	278 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	C20orf173	Q96LM9	149 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	SAV1	Q9H4B6	383 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	HLA-DRB4	X5D2U9	266 aa		11.1	□□□□□ -0.63
ABCF3-208	ENST00000471226	TRAV8-2	A0A0B4J237	113 aa		11.09	□□□□□ -0.63
ABCF3-208	ENST00000471226	C3orf84	H3BNL1	204 aa		11.09	□□□□□ -0.63
ABCF3-208	ENST00000471226	TMEM41B	Q5BJD5	291 aa		11.09	□□□□□ -0.63
ABCF3-208	ENST00000471226	CLUHP3	Q96NS8	147 aa		11.09	□□□□□ -0.63
ABCF3-208	ENST00000471226	ATP5S	Q99766	215 aa		11.09	□□□□□ -0.63
ABCF3-208	ENST00000471226	C4BPB	P20851	252 aa		11.08	□□□□□ -0.64
ABCF3-208	ENST00000471226	FGL1	Q08830	312 aa		11.08	□□□□□ -0.64
ABCF3-208	ENST00000471226	SPATA31B1P	Q5VZV4	182 aa		11.08	□□□□□ -0.64
ABCF3-208	ENST00000471226	BPIFA4P	Q86YQ2	179 aa		11.08	□□□□□ -0.64
ABCF3-208	ENST00000471226	RPRM	Q9NS64	109 aa		11.08	□□□□□ -0.64
ABCF3-208	ENST00000471226		Q5BKY6	102 aa		11.07	□□□□□ -0.64
ABCF3-208	ENST00000471226	IGFL4	Q6B9Z1	124 aa		11.07	□□□□□ -0.64
ABCF3-208	ENST00000471226	CSNK1G2-AS1	Q8NCQ2	148 aa		11.07	□□□□□ -0.64
ABCF3-208	ENST00000471226	SMIM3	Q9BZL3	60 aa		11.07	□□□□□ -0.64
ABCF3-208	ENST00000471226	TRAV5	A0A0B4J249	113 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226		A0A0J9YX75	114 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226		F6UB75	175 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226	IGLC2	P0DOY2	106 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226	CXCL2	P19875	107 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226	GCSAML	Q5JQS6	135 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226	ZNF709	Q8N972	641 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226	RARRES2	Q99969	163 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226	HRH4	Q9H3N8	390 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226	WFDC1	Q9HC57	220 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226	KCNIP2	Q9NS61	270 aa		11.06	□□□□□ -0.64
ABCF3-208	ENST00000471226		A8MTW9	85 aa		11.05	□□□□□ -0.64
ABCF3-208	ENST00000471226	C17orf112	F2Z3M2	114 aa		11.05	□□□□□ -0.64
ABCF3-208	ENST00000471226	IFNA5	P01569	189 aa		11.05	□□□□□ -0.64
ABCF3-208	ENST00000471226	NUTF2	P61970	127 aa	Known RBP	11.05	□□□□□ -0.64
ABCF3-208	ENST00000471226	EBLN2	Q6P2I7	272 aa		11.05	□□□□□ -0.64
ABCF3-208	ENST00000471226	LCN15	Q6UWW0	184 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms