RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 UNQ9165/PRO28630Q6UXU0 137 aa10.66□□□□□ -0.7
HMGXB4-206ENST00000466438 TTC9CQ8N5M4 171 aa10.66□□□□□ -0.7
HMGXB4-206ENST00000466438 GINS3Q9BRX5 216 aa10.66□□□□□ -0.7
HMGXB4-206ENST00000466438 NDUFAF3Q9BU61 184 aa10.66□□□□□ -0.7
HMGXB4-206ENST00000466438 WFDC1Q9HC57 220 aa10.66□□□□□ -0.7
HMGXB4-206ENST00000466438 F11RQ9Y624 299 aaKnown RBP10.66□□□□□ -0.7
HMGXB4-206ENST00000466438 MYCBP2O75592 4640 aa10.66□□□□□ -0.7
HMGXB4-206ENST00000466438 SMCO3A2RU48 225 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 OR4C46A6NHA9 309 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 NPIPB5A8MRT5 1133 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 PRSS46E5RG02 174 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 MPDU1O75352 247 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 SEC11BP0C7V7 166 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 DEFA4P12838 97 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 AREGP15514 252 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 RAB14P61106 215 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 TNP2Q05952 138 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 ARL16Q0P5N6 197 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 ALKAL2Q6UX46 152 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 HSD17B11Q8NBQ5 300 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 LRRC20Q8TCA0 184 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 TMEM170AQ8WVE7 144 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 SLC35E1Q96K37 410 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 ARV1Q9H2C2 271 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 KCNIP2Q9NS61 270 aa10.65□□□□□ -0.7
HMGXB4-206ENST00000466438 C17orf112F2Z3M2 114 aa10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 CFDP00746 253 aaPredicted RBP10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 IGHV3-23P01764 117 aa10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 REG1AP05451 166 aa10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 GPX4P36969 197 aaPredicted RBP10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 OPRK1P41145 380 aa10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 ELLP55199 621 aaPredicted RBP10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 AKR1C1Q04828 323 aa10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 WDR61Q9GZS3 305 aaKnown RBP10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 NPVFQ9HCQ7 196 aa10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
HMGXB4-206ENST00000466438 DEFB131BA0A096LNP1 70 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 CA1P00915 261 aaPredicted RBP10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 CRYGCP07315 174 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 RBMY1A1P0DJD3 496 aaKnown RBP10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 RBMY1CP0DJD4 496 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 SPP1P10451 314 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 FGF7P21781 194 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 RAB31Q13636 194 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 UBE2DNLQ8IWF7 75 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 ZNF709Q8N972 641 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 TMED6Q8WW62 240 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 MISP3Q96FF7 219 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 PSMG3Q9BT73 122 aaPredicted RBP10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 THYN1Q9P016 225 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 TIMM9Q9Y5J7 89 aa10.63□□□□□ -0.71
HMGXB4-206ENST00000466438 IGHV4-28A0A0C4DH34 117 aa10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 HIST1H1BP16401 226 aaKnown RBP10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 ATP6V0CP27449 155 aa10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 RAB5CP51148 216 aa10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 ZNF124Q15973 351 aa10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 TEPPQ6URK8 271 aa10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 RNF141Q8WVD5 230 aa10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 SLC25A32Q9H2D1 315 aa10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 WDR83OSQ9Y284 106 aa10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 S4R3C0 116 aa10.62□□□□□ -0.71
HMGXB4-206ENST00000466438 UMAD1C9J7I0 102 aa10.61□□□□□ -0.71
HMGXB4-206ENST00000466438 TMEM144Q7Z5S9 345 aa10.61□□□□□ -0.71
HMGXB4-206ENST00000466438 OR2G3Q8NGZ4 309 aa10.61□□□□□ -0.71
HMGXB4-206ENST00000466438 EEF1AKMT3Q96AZ1 226 aa10.61□□□□□ -0.71
HMGXB4-206ENST00000466438 CHRDL1Q9BU40 450 aa10.61□□□□□ -0.71
HMGXB4-206ENST00000466438 SRRM2Q9UQ35 2752 aaKnown RBP10.6□□□□□ -0.71
HMGXB4-206ENST00000466438 SCGB2A1O75556 95 aa10.6□□□□□ -0.71
HMGXB4-206ENST00000466438 SERF2P84101 59 aa10.6□□□□□ -0.71
HMGXB4-206ENST00000466438 AKR1C8PQ5T2L2 129 aa10.6□□□□□ -0.71
HMGXB4-206ENST00000466438 NPCDR1Q9BY65 106 aa10.6□□□□□ -0.71
HMGXB4-206ENST00000466438 MT-CO2P00403 227 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 MBP02144 154 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 MIFP14174 115 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 SULT1A2P50226 295 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 CMC4P56277 68 aaPredicted RBP10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 NDUFA5Q16718 116 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 CLLU1Q5K131 121 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 DPPA3Q6W0C5 159 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 TMEM182Q6ZP80 229 aaPredicted RBP10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 C19orf35Q6ZS72 473 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 C18orf15Q96N68 181 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 RSG1Q9BU20 258 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 SH3BGRL3Q9H299 93 aa10.59□□□□□ -0.71
HMGXB4-206ENST00000466438 IGLV11-55A0A075B6I3 123 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 TRBV7-1A0A0A6YYK4 115 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 CLEC3BP05452 202 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 CAMLGP49069 296 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 BLOC1S1P78537 153 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 GAMTQ14353 236 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 FAM74A1Q5RGS3 127 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 SAT2Q96F10 170 aaPredicted RBP10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 ACY3Q96HD9 319 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 FANCD2OSQ96PS1 177 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 SCRT1Q9BWW7 348 aa10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 FNDC4Q9H6D8 234 aaPredicted RBP10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 DAZ1Q9NQZ3 744 aaKnown RBP10.58□□□□□ -0.72
HMGXB4-206ENST00000466438 ELOA3CA0A087WX78 387 aaPredicted RBP10.57□□□□□ -0.72
HMGXB4-206ENST00000466438 ZNF705EA8MWA4 302 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms