RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PET100P0DJ07 73 aa9.46□□□□□ -0.9
COL5A1-206ENST00000465877 SPP1P10451 314 aa9.46□□□□□ -0.9
COL5A1-206ENST00000465877 C4BPBP20851 252 aa9.46□□□□□ -0.9
COL5A1-206ENST00000465877 ID1P41134 155 aa9.46□□□□□ -0.9
COL5A1-206ENST00000465877 PXDC1Q5TGL8 231 aa9.46□□□□□ -0.9
COL5A1-206ENST00000465877 SAMD13Q5VXD3 122 aa9.46□□□□□ -0.9
COL5A1-206ENST00000465877 RYR3Q15413 4870 aa9.46□□□□□ -0.9
COL5A1-206ENST00000465877 TENM2Q9NT68 2774 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 ISLRO14498 428 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 COX7A2P2O60397 106 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 MPC2O95563 127 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 RPL7P18124 248 aaKnown RBP9.45□□□□□ -0.9
COL5A1-206ENST00000465877 ATF4P18848 351 aaPredicted RBP9.45□□□□□ -0.9
COL5A1-206ENST00000465877 RAB31Q13636 194 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 OPCMLQ14982 345 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 MORN3Q6PF18 240 aaPredicted RBP9.45□□□□□ -0.9
COL5A1-206ENST00000465877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 PATE2Q6UY27 113 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 S100A7AQ86SG5 101 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 OR5C1Q8NGR4 320 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 C17orf77Q96MU5 243 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 SLC25A31Q9H0C2 315 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
COL5A1-206ENST00000465877 LYL1P12980 280 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 FGF7P21781 194 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 DEFB1P60022 68 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 PRR20EP86478 221 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 PRR20CP86479 221 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 PRR20DP86480 221 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 PRR20BP86481 221 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 PRR20AP86496 221 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 NHLH2Q02577 135 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 ATP6V1FQ16864 119 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 CASC10Q5T4H9 136 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 GDF5OSQ5U4N7 250 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 LINC00305Q7Z4B0 112 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 C16orf92Q96LL3 132 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 LINC00052Q96N35 136 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 RSG1Q9BU20 258 aa9.44□□□□□ -0.9
COL5A1-206ENST00000465877 ALMS1Q8TCU4 4167 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 A0A087X0K7 114 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 A0A0J9YWU9 116 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 MPDU1O75352 247 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 CXCL3P19876 107 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 CLINT1Q14677 625 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 FOXI2Q6ZQN5 318 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 TMEM37Q8WXS4 190 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 PFDN5Q99471 154 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 NPCDR1Q9BY65 106 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 SAV1Q9H4B6 383 aaPredicted RBP9.43□□□□□ -0.9
COL5A1-206ENST00000465877 MBD2Q9UBB5 411 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 RNF24Q9Y225 148 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
COL5A1-206ENST00000465877 ELOA3CA0A087WX78 387 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-206ENST00000465877 H3BMM0 161 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 MRPS12O15235 138 aaKnown RBP9.42□□□□□ -0.9
COL5A1-206ENST00000465877 GIG44P09565 113 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-206ENST00000465877 RPL29P47914 159 aaKnown RBP9.42□□□□□ -0.9
COL5A1-206ENST00000465877 B2MP61769 119 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 FGL1Q08830 312 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 RGS21Q2M5E4 152 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 TMEM41BQ5BJD5 291 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 MORN5Q5VZ52 161 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 C10orf113Q5VZT2 155 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 Q6ZRG5 221 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 OR11H7Q8NGC8 314 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 OR1L4Q8NGR5 311 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 THAP6Q8TBB0 222 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 C20orf173Q96LM9 149 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 RPRMQ9NS64 109 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 SLC39A9Q9NUM3 307 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 HSPB11Q9Y547 144 aa9.42□□□□□ -0.9
COL5A1-206ENST00000465877 TRAV8-2A0A0B4J237 113 aa9.41□□□□□ -0.9
COL5A1-206ENST00000465877 F6UB75 175 aa9.41□□□□□ -0.9
COL5A1-206ENST00000465877 FCN2Q15485 313 aa9.41□□□□□ -0.9
COL5A1-206ENST00000465877 RNF182Q8N6D2 247 aa9.41□□□□□ -0.9
COL5A1-206ENST00000465877 OR11H2Q8NH07 326 aa9.41□□□□□ -0.9
COL5A1-206ENST00000465877 RARRES2Q99969 163 aa9.41□□□□□ -0.9
COL5A1-206ENST00000465877 RNF126Q9BV68 326 aa9.41□□□□□ -0.9
COL5A1-206ENST00000465877 MED28Q9H204 178 aa9.41□□□□□ -0.9
COL5A1-206ENST00000465877 DNAH1Q9P2D7 4330 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 CXCL2P19875 107 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 NUTF2P61970 127 aaKnown RBP9.4□□□□□ -0.9
COL5A1-206ENST00000465877 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 LCN15Q6UWW0 184 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 BPIFA4PQ86YQ2 179 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 IL17DQ8TAD2 202 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 CHAC2Q8WUX2 184 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 ATP5SQ99766 215 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 C1QTNF4Q9BXJ3 329 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 WDR61Q9GZS3 305 aaKnown RBP9.4□□□□□ -0.9
COL5A1-206ENST00000465877 C11orf68Q9H3H3 251 aaKnown RBP9.4□□□□□ -0.9
COL5A1-206ENST00000465877 KCNIP2Q9NS61 270 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 CLEC5AQ9NY25 188 aa9.4□□□□□ -0.9
COL5A1-206ENST00000465877 A0A0J9YX75 114 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms