RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ODF3L2Q3SX64 289 aa14.76□□□□□ -0.05
COL9A3-204ENST00000463487 DCANP1Q8TF63 244 aa14.76□□□□□ -0.05
COL9A3-204ENST00000463487 SLC25A32Q9H2D1 315 aa14.76□□□□□ -0.05
COL9A3-204ENST00000463487 C19orf73Q9NVV2 129 aa14.76□□□□□ -0.05
COL9A3-204ENST00000463487 LEMD1Q68G75 181 aa14.75□□□□□ -0.05
COL9A3-204ENST00000463487 WFDC10AQ9H1F0 79 aa14.75□□□□□ -0.05
COL9A3-204ENST00000463487 MAP6D1Q9H9H5 199 aa14.75□□□□□ -0.05
COL9A3-204ENST00000463487 BORCS7-ASMTA0A0B4J1R7 106 aa14.74□□□□□ -0.05
COL9A3-204ENST00000463487 ZNF688P0C7X2 276 aa14.74□□□□□ -0.05
COL9A3-204ENST00000463487 PATE2Q6UY27 113 aa14.74□□□□□ -0.05
COL9A3-204ENST00000463487 BPIFA4PQ86YQ2 179 aa14.74□□□□□ -0.05
COL9A3-204ENST00000463487 ARPC5O15511 151 aa14.73□□□□□ -0.05
COL9A3-204ENST00000463487 NHLRC4P0CG21 123 aaPredicted RBP14.73□□□□□ -0.05
COL9A3-204ENST00000463487 DEFB131AP59861 70 aa14.73□□□□□ -0.05
COL9A3-204ENST00000463487 TMEM37Q8WXS4 190 aa14.73□□□□□ -0.05
COL9A3-204ENST00000463487 RSG1Q9BU20 258 aa14.73□□□□□ -0.05
COL9A3-204ENST00000463487 LOC102724200A0A096LPH7 203 aaPredicted RBP14.72□□□□□ -0.05
COL9A3-204ENST00000463487 RNF222A6NCQ9 220 aa14.72□□□□□ -0.05
COL9A3-204ENST00000463487 ISLRO14498 428 aa14.72□□□□□ -0.05
COL9A3-204ENST00000463487 TAAR5O14804 337 aa14.72□□□□□ -0.05
COL9A3-204ENST00000463487 PSMB3P49720 205 aa14.72□□□□□ -0.05
COL9A3-204ENST00000463487 MFFQ9GZY8 342 aa14.72□□□□□ -0.05
COL9A3-204ENST00000463487 WFDC1Q9HC57 220 aa14.72□□□□□ -0.05
COL9A3-204ENST00000463487 TIMM9Q9Y5J7 89 aa14.72□□□□□ -0.05
COL9A3-204ENST00000463487 G3V3Q6 166 aa14.71□□□□□ -0.05
COL9A3-204ENST00000463487 APOC4P55056 127 aa14.71□□□□□ -0.05
COL9A3-204ENST00000463487 PSMG4Q5JS54 123 aa14.71□□□□□ -0.05
COL9A3-204ENST00000463487 APRG1Q8IVJ8 170 aa14.71□□□□□ -0.05
COL9A3-204ENST00000463487 LRRC20Q8TCA0 184 aa14.71□□□□□ -0.05
COL9A3-204ENST00000463487 C16orf92Q96LL3 132 aa14.71□□□□□ -0.05
COL9A3-204ENST00000463487 MRPL32Q9BYC8 188 aaKnown RBP14.71□□□□□ -0.05
COL9A3-204ENST00000463487 hCG_2014768A0A024R1R8 64 aa14.7□□□□□ -0.06
COL9A3-204ENST00000463487 HMSDA8MTL9 139 aa14.7□□□□□ -0.06
COL9A3-204ENST00000463487 SMLR1H3BR10 107 aa14.7□□□□□ -0.06
COL9A3-204ENST00000463487 FFAR4Q5NUL3 377 aa14.7□□□□□ -0.06
COL9A3-204ENST00000463487 FAM78BQ5VT40 261 aa14.7□□□□□ -0.06
COL9A3-204ENST00000463487 STHQ8IWL8 128 aa14.7□□□□□ -0.06
COL9A3-204ENST00000463487 FAM24BQ8N5W8 94 aa14.7□□□□□ -0.06
COL9A3-204ENST00000463487 ZMAT4Q9H898 229 aa14.7□□□□□ -0.06
COL9A3-204ENST00000463487 A0A087X0K7 114 aa14.69□□□□□ -0.06
COL9A3-204ENST00000463487 CXCL2P19875 107 aa14.69□□□□□ -0.06
COL9A3-204ENST00000463487 ZNF345Q14585 488 aa14.69□□□□□ -0.06
COL9A3-204ENST00000463487 ACOT6Q3I5F7 207 aaPredicted RBP14.69□□□□□ -0.06
COL9A3-204ENST00000463487 GNPNAT1Q96EK6 184 aaPredicted RBP14.69□□□□□ -0.06
COL9A3-204ENST00000463487 ASCL2Q99929 193 aa14.69□□□□□ -0.06
COL9A3-204ENST00000463487 RBMY1BA6NDE4 496 aaKnown RBP14.68□□□□□ -0.06
COL9A3-204ENST00000463487 RBMY1EA6NEQ0 496 aaKnown RBP14.68□□□□□ -0.06
COL9A3-204ENST00000463487 JTBO76095 146 aa14.68□□□□□ -0.06
COL9A3-204ENST00000463487 RBMY1DP0C7P1 496 aaKnown RBP14.68□□□□□ -0.06
COL9A3-204ENST00000463487 GUK1Q16774 197 aa14.68□□□□□ -0.06
COL9A3-204ENST00000463487 LCN15Q6UWW0 184 aa14.68□□□□□ -0.06
COL9A3-204ENST00000463487 AKAP14Q86UN6 197 aa14.68□□□□□ -0.06
COL9A3-204ENST00000463487 SBSPONQ8IVN8 264 aa14.68□□□□□ -0.06
COL9A3-204ENST00000463487 TCTE3Q8IZS6 198 aa14.68□□□□□ -0.06
COL9A3-204ENST00000463487 HSD17B11Q8NBQ5 300 aa14.68□□□□□ -0.06
COL9A3-204ENST00000463487 LINC00052Q96N35 136 aa14.68□□□□□ -0.06
COL9A3-204ENST00000463487 A0A0D9SG52 128 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 KIR2DL5BA0A0G2JN68 375 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 KIR2DL5BA0A0G2JPC4 375 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 TAS2R45P59539 299 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 RHOBP62745 196 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 HAGHQ16775 308 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 LINC00322Q6ZN03 302 aaPredicted RBP14.67□□□□□ -0.06
COL9A3-204ENST00000463487 KIR2DL5AQ8N109 375 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 KIR2DL5BQ8NHK3 375 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 CITED4Q96RK1 184 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 SLC50A1Q9BRV3 221 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 PSMG3Q9BT73 122 aaPredicted RBP14.67□□□□□ -0.06
COL9A3-204ENST00000463487 RPRMQ9NS64 109 aa14.67□□□□□ -0.06
COL9A3-204ENST00000463487 UBE2CO00762 179 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 SOCS3O14543 225 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 M6PRP20645 277 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 SERF2P84101 59 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 GCSAMLQ5JQS6 135 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 MORN5Q5VZ52 161 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 ST6GAL2Q96JF0 529 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 ARPC5LQ9BPX5 153 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 SPATA25Q9BR10 227 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 HRH4Q9H3N8 390 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 TMEM14CQ9P0S9 112 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 FUT9Q9Y231 359 aa14.66□□□□□ -0.06
COL9A3-204ENST00000463487 A0A1W2PPV4 95 aa14.65□□□□□ -0.06
COL9A3-204ENST00000463487 MBP02144 154 aa14.65□□□□□ -0.06
COL9A3-204ENST00000463487 RPL35AP18077 110 aaKnown RBP14.65□□□□□ -0.06
COL9A3-204ENST00000463487 SPATA31B1PQ5VZV4 182 aa14.65□□□□□ -0.06
COL9A3-204ENST00000463487 RPL7L1Q6DKI1 246 aaKnown RBP14.65□□□□□ -0.06
COL9A3-204ENST00000463487 KCNRGQ8N5I3 272 aa14.65□□□□□ -0.06
COL9A3-204ENST00000463487 OR2G3Q8NGZ4 309 aa14.65□□□□□ -0.06
COL9A3-204ENST00000463487 CLEC5AQ9NY25 188 aa14.65□□□□□ -0.06
COL9A3-204ENST00000463487 KANTRA0A1W2PQU2 76 aa14.64□□□□□ -0.07
COL9A3-204ENST00000463487 MRPS12O15235 138 aaKnown RBP14.64□□□□□ -0.07
COL9A3-204ENST00000463487 ATP6V0CP27449 155 aa14.64□□□□□ -0.07
COL9A3-204ENST00000463487 ZNF124Q15973 351 aa14.64□□□□□ -0.07
COL9A3-204ENST00000463487 ACTL10Q5JWF8 245 aa14.64□□□□□ -0.07
COL9A3-204ENST00000463487 EBLN2Q6P2I7 272 aa14.64□□□□□ -0.07
COL9A3-204ENST00000463487 TRAV5A0A0B4J249 113 aa14.63□□□□□ -0.07
COL9A3-204ENST00000463487 PFDN1O60925 122 aa14.63□□□□□ -0.07
COL9A3-204ENST00000463487 NUTF2P61970 127 aaKnown RBP14.63□□□□□ -0.07
COL9A3-204ENST00000463487 EIF5AP63241 154 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms