RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 A0A0D9SEW6 157 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 A0A1B0GVX0 72 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 A6NED7 52 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 ZNF727A8MUV8 499 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 M0R129 80 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 UQCRQO14949 82 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 KLF7O75840 302 aaPredicted RBP2.17□□□□□ -2.06
VPS8-215ENST00000460158 NDUFB2O95178 105 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 MPC2O95563 127 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 TNFP01375 233 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 C1QAP02745 245 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 OR5AC1P0C628 307 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 SPINK8P0C7L1 97 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 SLC25A16P16260 332 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 HLA-DMBP28068 263 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 CRISP3P54108 245 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 FXYD7P58549 80 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 TSPEAR-AS2P59090 65 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 CATR1Q13166 79 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 ZNF705AQ6ZN79 300 aaPredicted RBP2.17□□□□□ -2.06
VPS8-215ENST00000460158 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
VPS8-215ENST00000460158 MIR17HGQ75NE6 70 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 PHF5AQ7RTV0 110 aaKnown RBP2.17□□□□□ -2.06
VPS8-215ENST00000460158 AAED1Q7RTV5 226 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 TTC9CQ8N5M4 171 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 C5orf17Q8NAS9 161 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 OR4B1Q8NGF8 309 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 RBPMSQ93062 196 aaKnown RBP2.17□□□□□ -2.06
VPS8-215ENST00000460158 MCEEQ96PE7 176 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 SCGB3A1Q96QR1 104 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 NAA60Q9H7X0 242 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 DNMBPQ6XZF7 1577 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 RGPD4Q7Z3J3 1758 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 CASZ1Q86V15 1759 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 SCN9AQ15858 1988 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 THADAQ6YHU6 1953 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 ARID1AO14497 2285 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 MAP3K1Q13233 1512 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 TOPBP1Q92547 1522 aa2.17□□□□□ -2.06
VPS8-215ENST00000460158 ANKRD36BQ8N2N9 1353 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 ZNF407Q9C0G0 2248 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 IGHV1-3A0A0C4DH29 117 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 A0A0J9YW62 118 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 A6NDX4 124 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 H3BQF6 201 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 C19orf84I3L1E1 186 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 SOD1P00441 154 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 SLC25A5P05141 298 aaKnown RBP2.16□□□□□ -2.06
VPS8-215ENST00000460158 TLX1NBP0CAT3 122 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 IFITM1P13164 125 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 SNRPD3P62318 126 aaKnown RBP2.16□□□□□ -2.06
VPS8-215ENST00000460158 UBA52P62987 128 aaKnown RBP2.16□□□□□ -2.06
VPS8-215ENST00000460158 TMEM155Q4W5P6 130 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 C7orf65Q6ZTY9 151 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 Q8N976 141 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 Q8N9W7 124 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 MORN4Q8NDC4 146 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 RAB37Q96AX2 223 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 DPH3Q96FX2 82 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 TTTY13Q9BZ97 58 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 PLA2G2FQ9BZM2 168 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 FAM60AQ9NP50 221 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 ZNRD1Q9P1U0 126 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 ZNF835Q9Y2P0 537 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 AP4S1Q9Y587 144 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 HSPE1-MOB4S4R3N1 261 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 ARAP2Q8WZ64 1704 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 LRRIQ1Q96JM4 1722 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 RRBP1Q9P2E9 1410 aaKnown RBP2.16□□□□□ -2.06
VPS8-215ENST00000460158 YEATS2Q9ULM3 1422 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 PLXNA3P51805 1871 aa2.16□□□□□ -2.06
VPS8-215ENST00000460158 SCN3AQ9NY46 2000 aa2.15□□□□□ -2.06
VPS8-215ENST00000460158 ARHGEF28Q8N1W1 1705 aaKnown RBP2.15□□□□□ -2.07
VPS8-215ENST00000460158 TRAV12-2A0A075B6T6 113 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.15□□□□□ -2.07
VPS8-215ENST00000460158 TMEM223A0PJW6 202 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 GRIFINA4D1Z8 144 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 RER1O15258 196 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 SYNGR2O43760 224 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 SLC25A20O43772 301 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 IGHV1-46P01743 117 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 IGHV3-7P01780 117 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 HBDP02042 147 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 PMP2P02689 132 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 RBP4P02753 201 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 TRGV3P03979 118 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 CD2P06729 351 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 TRGC1P0CF51 173 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 ZNF286BP0CG31 522 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 RNASE4P34096 147 aaKnown RBP2.15□□□□□ -2.07
VPS8-215ENST00000460158 TGFBR1P36897 503 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 ZNF90Q03938 601 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 CLLU1Q5K131 121 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 C9orf153Q5TBE3 101 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 LINC01545Q5VT33 79 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 NOXRED1Q6NXP6 359 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 TMEM91Q6ZNR0 172 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 TEN1Q86WV5 123 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 LINC00311Q8N616 119 aa2.15□□□□□ -2.07
VPS8-215ENST00000460158 ZFAND2AQ8N6M9 145 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms