RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 HIGD1AQ9Y241 93 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 TRAV10A0A0B4J240 114 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 ZNF705FA8MVS1 300 aaPredicted RBP11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 TSC22D2O75157 780 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 HYPMO75409 117 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 OR5G3P0C626 314 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 ZNF705DP0CH99 300 aaPredicted RBP11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 ZNF705BP0CI00 300 aaPredicted RBP11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 EMP1P54849 157 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 TAS2R30P59541 319 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 RAP2BP61225 183 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 PSG9Q00887 426 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 FGL1Q08830 312 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 SLC38A11Q08AI6 406 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 SPATA31B1PQ5VZV4 182 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 SHANK2-AS3Q9BTD1 123 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 NUDT15Q9NV35 164 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 MGAT4CQ9UBM8 478 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 APLNQ9ULZ1 77 aa11.82□□□□□ -0.52
NCKIPSD-208ENST00000454134 TRAV8-2A0A0B4J237 113 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 C7orf66A4D0T2 115 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 FAM25EA8MYX2 175 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 S100A7P31151 101 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 SELENOTP62341 195 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 PRR20EP86478 221 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 PRR20CP86479 221 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 PRR20DP86480 221 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 PRR20BP86481 221 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 PRR20AP86496 221 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 ZNF846Q147U1 533 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 RNF182Q8N6D2 247 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 GPR82Q96P67 336 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 ARL6Q9H0F7 186 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 NPVFQ9HCQ7 196 aa11.81□□□□□ -0.52
NCKIPSD-208ENST00000454134 FNDC10F2Z333 226 aa11.8□□□□□ -0.52
NCKIPSD-208ENST00000454134 TCTAP57738 103 aa11.8□□□□□ -0.52
NCKIPSD-208ENST00000454134 PLP1P60201 277 aa11.8□□□□□ -0.52
NCKIPSD-208ENST00000454134 TEPPQ6URK8 271 aa11.8□□□□□ -0.52
NCKIPSD-208ENST00000454134 PATE2Q6UY27 113 aa11.8□□□□□ -0.52
NCKIPSD-208ENST00000454134 ZNF431Q8TF32 576 aaPredicted RBP11.8□□□□□ -0.52
NCKIPSD-208ENST00000454134 NEU1Q99519 415 aa11.8□□□□□ -0.52
NCKIPSD-208ENST00000454134 LSM5Q9Y4Y9 91 aaKnown RBP11.8□□□□□ -0.52
NCKIPSD-208ENST00000454134 IGHV4-4A0A075B6R2 117 aa11.79□□□□□ -0.52
NCKIPSD-208ENST00000454134 DEFB131BA0A096LNP1 70 aa11.79□□□□□ -0.52
NCKIPSD-208ENST00000454134 C5orf51A6NDU8 294 aa11.79□□□□□ -0.52
NCKIPSD-208ENST00000454134 L7N2F9 121 aa11.79□□□□□ -0.52
NCKIPSD-208ENST00000454134 VAMP2P63027 116 aa11.79□□□□□ -0.52
NCKIPSD-208ENST00000454134 AMTNQ6UX39 209 aa11.79□□□□□ -0.52
NCKIPSD-208ENST00000454134 C1orf158Q8N1D5 194 aa11.79□□□□□ -0.52
NCKIPSD-208ENST00000454134 CCDC32Q9BV29 185 aa11.79□□□□□ -0.52
NCKIPSD-208ENST00000454134 GOLT1BQ9Y3E0 138 aa11.79□□□□□ -0.52
NCKIPSD-208ENST00000454134 BIRC6Q9NR09 4857 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 KMT2AQ03164 3969 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 SMIM9A6NGZ8 99 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 K7EPK0 472 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 GOSR2O14653 212 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 H2AFB2P0C5Z0 115 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 PRB4P10163 310 aaPredicted RBP11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 RPL7P18124 248 aaKnown RBP11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 BCAP31P51572 246 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 C12orf45Q8N5I9 185 aaPredicted RBP11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 ZNF738Q8NE65 137 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 ARV1Q9H2C2 271 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 RFNGQ9Y644 331 aa11.78□□□□□ -0.52
NCKIPSD-208ENST00000454134 A8MTW9 85 aa11.77□□□□□ -0.53
NCKIPSD-208ENST00000454134 AGPAT2O15120 278 aa11.77□□□□□ -0.53
NCKIPSD-208ENST00000454134 SPART-AS1P0CW21 52 aa11.77□□□□□ -0.53
NCKIPSD-208ENST00000454134 ZNF546Q86UE3 836 aa11.77□□□□□ -0.53
NCKIPSD-208ENST00000454134 MGST2Q99735 147 aa11.77□□□□□ -0.53
NCKIPSD-208ENST00000454134 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.53
NCKIPSD-208ENST00000454134 FAM240BA0A1B0GVZ2 78 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 TMEM189A5PLL7 270 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 FAM24AA6NFZ4 105 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 M0R2Z0 102 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 CST7O76096 145 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 SNRPCP09234 159 aaKnown RBP11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 CAV2P51636 162 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 OR11H7Q8NGC8 314 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 C2orf50Q96LR7 162 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 RNF126Q9BV68 326 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 GGACTQ9BVM4 153 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 C11orf1Q9H5F2 150 aa11.76□□□□□ -0.53
NCKIPSD-208ENST00000454134 A0A087X0K7 114 aa11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 LOC102723971A0A1B0GUV8 181 aa11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 HBE1P02100 147 aa11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 PRM2P04554 102 aa11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 FAM222AQ5U5X8 452 aa11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 LRRC20Q8TCA0 184 aa11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 IGF2BP2-AS1Q96M15 143 aa11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 DKK2Q9UBU2 259 aa11.75□□□□□ -0.53
NCKIPSD-208ENST00000454134 MRPS12O15235 138 aaKnown RBP11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 AMBPP02760 352 aa11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 CXCL3P19876 107 aa11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 S100A10P60903 97 aa11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 RRN3P1Q2M238 152 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms