RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.83□□□□□ -0.36
CNOT3-204ENST00000447684 ATP5IP56385 69 aaPredicted RBP12.83□□□□□ -0.36
CNOT3-204ENST00000447684 ETDBQ3ZM63 59 aa12.83□□□□□ -0.36
CNOT3-204ENST00000447684 VGLL1Q99990 258 aa12.83□□□□□ -0.36
CNOT3-204ENST00000447684 MRPL20Q9BYC9 149 aaKnown RBP12.83□□□□□ -0.36
CNOT3-204ENST00000447684 ASPMQ8IZT6 3477 aa12.83□□□□□ -0.36
CNOT3-204ENST00000447684 J3QR89 54 aa12.82□□□□□ -0.36
CNOT3-204ENST00000447684 SPRY3O43610 288 aa12.82□□□□□ -0.36
CNOT3-204ENST00000447684 SCGB1A1P11684 91 aa12.82□□□□□ -0.36
CNOT3-204ENST00000447684 CCDC144NLQ6NUI1 221 aa12.82□□□□□ -0.36
CNOT3-204ENST00000447684 SLC25A48Q6ZT89 311 aaKnown RBP12.82□□□□□ -0.36
CNOT3-204ENST00000447684 DPF1Q92782 380 aa12.82□□□□□ -0.36
CNOT3-204ENST00000447684 WDFY4Q6ZS81 3184 aa12.82□□□□□ -0.36
CNOT3-204ENST00000447684 ARPC1AQ92747 370 aa12.82□□□□□ -0.36
CNOT3-204ENST00000447684 IFI27L1Q96BM0 104 aa12.82□□□□□ -0.36
CNOT3-204ENST00000447684 SUB1P53999 127 aaKnown RBP eCLIP12.81□□□□□ -0.36
CNOT3-204ENST00000447684 PRELID3AQ96N28 172 aa12.81□□□□□ -0.36
CNOT3-204ENST00000447684 SPRR3Q9UBC9 169 aa12.81□□□□□ -0.36
CNOT3-204ENST00000447684 TRAV26-1A0A087WT03 109 aa12.81□□□□□ -0.36
CNOT3-204ENST00000447684 C22orf46C9J442 243 aa12.81□□□□□ -0.36
CNOT3-204ENST00000447684 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
CNOT3-204ENST00000447684 FAM222BQ8WU58 562 aa12.81□□□□□ -0.36
CNOT3-204ENST00000447684 SMPXQ9UHP9 88 aa12.81□□□□□ -0.36
CNOT3-204ENST00000447684 SMKR1H3BMG3 65 aa12.81□□□□□ -0.36
CNOT3-204ENST00000447684 SIVA1O15304 175 aa12.81□□□□□ -0.36
CNOT3-204ENST00000447684 TMEM213A2RRL7 107 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 PATE3B3GLJ2 98 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 NPIPB6E9PJ23 425 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 H3BMG7 143 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 HBDP02042 147 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 AMTNQ6UX39 209 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 ZNF576Q9H609 170 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 TRGV5A0A0B4J1U4 118 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 SLC25A17O43808 307 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 CGB3P0DN86 165 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 CGB7P0DN87 165 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 LYZP61626 148 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 ATP5G2Q06055 141 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 PMS2CLQ68D20 193 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 RAB9BQ9NP90 201 aa12.8□□□□□ -0.36
CNOT3-204ENST00000447684 DSCAMO60469 2012 aa12.79□□□□□ -0.36
CNOT3-204ENST00000447684 K7EQM0 130 aa12.79□□□□□ -0.36
CNOT3-204ENST00000447684 GP9P14770 177 aa12.79□□□□□ -0.36
CNOT3-204ENST00000447684 CCL13Q99616 98 aa12.79□□□□□ -0.36
CNOT3-204ENST00000447684 CFAP47Q6ZTR5 3102 aa12.79□□□□□ -0.36
CNOT3-204ENST00000447684 IGKV2D-26A0A0A0MRZ7 120 aa12.79□□□□□ -0.36
CNOT3-204ENST00000447684 CHAC1Q9BUX1 264 aa12.79□□□□□ -0.36
CNOT3-204ENST00000447684 SPANXB1Q9NS25 103 aaPredicted RBP12.79□□□□□ -0.36
CNOT3-204ENST00000447684 RP1L1Q8IWN7 2480 aaPredicted RBP12.79□□□□□ -0.36
CNOT3-204ENST00000447684 MZT1Q08AG7 82 aa12.78□□□□□ -0.36
CNOT3-204ENST00000447684 FAM216BQ8N7L0 139 aa12.78□□□□□ -0.36
CNOT3-204ENST00000447684 SPAG8Q99932 426 aaPredicted RBP12.78□□□□□ -0.36
CNOT3-204ENST00000447684 TMEM238LA0A1B0GVL6 79 aa12.78□□□□□ -0.36
CNOT3-204ENST00000447684 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
CNOT3-204ENST00000447684 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
CNOT3-204ENST00000447684 KLRC4-KLRK1H3BQV0 150 aa12.77□□□□□ -0.36
CNOT3-204ENST00000447684 IGKV3-15P01624 115 aa12.77□□□□□ -0.36
CNOT3-204ENST00000447684 ZCCHC24Q8N2G6 241 aaKnown RBP12.77□□□□□ -0.36
CNOT3-204ENST00000447684 THAP8Q8NA92 274 aa12.77□□□□□ -0.36
CNOT3-204ENST00000447684 ROS1P08922 2347 aa12.77□□□□□ -0.36
CNOT3-204ENST00000447684 FCER1GP30273 86 aa12.77□□□□□ -0.37
CNOT3-204ENST00000447684 INSL3P51460 131 aa12.77□□□□□ -0.37
CNOT3-204ENST00000447684 CRYBA4P53673 196 aa12.77□□□□□ -0.37
CNOT3-204ENST00000447684 ORMDL3Q8N138 153 aa12.77□□□□□ -0.37
CNOT3-204ENST00000447684 OSR1Q8TAX0 266 aaPredicted RBP12.77□□□□□ -0.37
CNOT3-204ENST00000447684 A0A1W2PRD5 423 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 A0A1W2PRF3 423 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 A0A1W2PRM7 423 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 NDUFS7O75251 213 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 TNFRSF1AP19438 455 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 MSMPQ1L6U9 139 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 Q6ZT83 130 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 CGB1A6NKQ9 187 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 TMEM105Q8N8V8 129 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 TPSG1Q9NRR2 321 aa12.76□□□□□ -0.37
CNOT3-204ENST00000447684 IGLV2-11P01706 119 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 PRSS1P07477 247 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 LYZL1Q6UWQ5 148 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 GTSCR1Q86UQ5 136 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 ZNF479Q96JC4 524 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 OTORQ9NRC9 128 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 OVOL3O00110 214 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 CKS2P33552 79 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 RPUSD1Q9UJJ7 312 aaKnown RBP12.75□□□□□ -0.37
CNOT3-204ENST00000447684 HIGD1AQ9Y241 93 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 A0A1W2PPI3 338 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 ZNF785A8K8V0 405 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 C17orf77Q96MU5 243 aa12.75□□□□□ -0.37
CNOT3-204ENST00000447684 PLCE1Q9P212 2302 aa12.74□□□□□ -0.37
CNOT3-204ENST00000447684 F8W1H4 67 aa12.74□□□□□ -0.37
CNOT3-204ENST00000447684 ENSAO43768 121 aaKnown RBP12.74□□□□□ -0.37
CNOT3-204ENST00000447684 PPIFP30405 207 aaKnown RBP12.74□□□□□ -0.37
CNOT3-204ENST00000447684 SMG1Q96Q15 3661 aaKnown RBP12.74□□□□□ -0.37
CNOT3-204ENST00000447684 LOC400499M0QZD8 3231 aa12.74□□□□□ -0.37
CNOT3-204ENST00000447684 IGHV1-18A0A0C4DH31 117 aa12.74□□□□□ -0.37
CNOT3-204ENST00000447684 MBNL2Q5VZF2 373 aaKnown RBP12.74□□□□□ -0.37
CNOT3-204ENST00000447684 GEMIN7Q9H840 131 aaKnown RBP12.74□□□□□ -0.37
CNOT3-204ENST00000447684 IGHV3-72A0A0B4J1Y9 119 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 NPYP01303 97 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms