RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 OR51M1Q9H341 326 aa4.63□□□□□ -1.67
PTPRK-211ENST00000429595 RBKSQ9H477 322 aa4.63□□□□□ -1.67
PTPRK-211ENST00000429595 KCNIP2Q9NS61 270 aa4.63□□□□□ -1.67
PTPRK-211ENST00000429595 SLC39A9Q9NUM3 307 aa4.63□□□□□ -1.67
PTPRK-211ENST00000429595 OR1A1Q9P1Q5 309 aa4.63□□□□□ -1.67
PTPRK-211ENST00000429595 DPM3Q9P2X0 92 aa4.63□□□□□ -1.67
PTPRK-211ENST00000429595 SIRPB1O00241 398 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 EIF3GO75821 320 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTPRK-211ENST00000429595 KBTBD11O94819 623 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 TFF1P04155 84 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 TYMSP04818 313 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 PRDX2P32119 198 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 DUTP33316 252 aaKnown RBP4.62□□□□□ -1.67
PTPRK-211ENST00000429595 CEACAM3P40198 252 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 TCTAP57738 103 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 DLK1P80370 383 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 MEF2BQ02080 365 aaPredicted RBP4.62□□□□□ -1.67
PTPRK-211ENST00000429595 SLC38A11Q08AI6 406 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 HES1Q14469 280 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 TMEM241Q24JQ0 296 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 DGAT2L7PQ6IED9 249 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 SLC25A24Q6NUK1 477 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 H2BFWTQ7Z2G1 175 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 FAM24BQ8N5W8 94 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 C8orf31Q8N9H6 132 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 RNASE11Q8TAA1 199 aaKnown RBP4.62□□□□□ -1.67
PTPRK-211ENST00000429595 TMEM190Q8WZ59 177 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 ARPC1AQ92747 370 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 DLX4Q92988 240 aaPredicted RBP4.62□□□□□ -1.67
PTPRK-211ENST00000429595 SDSLQ96GA7 329 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 COQ2Q96H96 371 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 ZNF488Q96MN9 340 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 OR5B12Q96R08 314 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 OR6C3Q9NZP0 311 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 DOK5Q9P104 306 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 NAT8Q9UHE5 227 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 WDR83OSQ9Y284 106 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 RBM7Q9Y580 266 aaKnown RBP4.62□□□□□ -1.67
PTPRK-211ENST00000429595 LY96Q9Y6Y9 160 aa4.62□□□□□ -1.67
PTPRK-211ENST00000429595 TRAV9-1A0A075B6T8 112 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 A0A0J9YWU9 116 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 ODAMA1E959 279 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 MAP1LC3B2A6NCE7 125 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 PHOX2AO14813 284 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 PPP1R2P9O14990 202 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 PDE6DO43924 150 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 ACTL6BO94805 426 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 IGHG2P01859 326 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 PFN1P07737 140 aaKnown RBP4.61□□□□□ -1.67
PTPRK-211ENST00000429595 OR13C7P0DN81 318 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 OPRK1P41145 380 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 OR2B8PP59922 312 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 FABP9Q0Z7S8 132 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 ZNF726P1Q15940 193 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 ACOT6Q3I5F7 207 aaPredicted RBP4.61□□□□□ -1.67
PTPRK-211ENST00000429595 MORN2Q502X0 79 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 KRBOX4Q5JUW0 171 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 LDLRAD2Q5SZI1 272 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 CYB561D1Q8N8Q1 229 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 ZNF709Q8N972 641 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 OR1L1Q8NH94 360 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 DTD1Q8TEA8 209 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 IL1F10Q8WWZ1 152 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 UBE2E2Q96LR5 201 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 CLEC7AQ9BXN2 247 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 MAP1LC3BQ9GZQ8 125 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 PARP12Q9H0J9 701 aaKnown RBP4.61□□□□□ -1.67
PTPRK-211ENST00000429595 SRD5A3Q9H8P0 318 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 ZNF257Q9Y2Q1 563 aa4.61□□□□□ -1.67
PTPRK-211ENST00000429595 PUS1Q9Y606 427 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTPRK-211ENST00000429595 C17orf98A8MV24 154 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 PRSS46E5RG02 174 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 F6UZH7 168 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 LINC01619G3V211 115 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 HMGB3O15347 200 aaKnown RBP4.6□□□□□ -1.67
PTPRK-211ENST00000429595 TNFSF12O43508 249 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 AMBPP02760 352 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 METTL15P1P0C7V9 234 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 AREGP15514 252 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 NQO2P16083 231 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 TMEM11P17152 192 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 RPL30P62888 115 aaKnown RBP4.6□□□□□ -1.67
PTPRK-211ENST00000429595 RUNX1Q01196 453 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 SPANXN5Q5MJ07 72 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 SERTAD4-AS1Q5TG53 156 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 FAM71F2Q6NXP2 309 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 C5orf24Q7Z6I8 188 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 KRTAP7-1Q8IUC3 87 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 CD177Q8N6Q3 437 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 OR10G9Q8NGN4 311 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 OR10G7Q8NGN6 311 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 ZNF596Q8TC21 504 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 RNASEH2CQ8TDP1 164 aaKnown RBP4.6□□□□□ -1.67
PTPRK-211ENST00000429595 ACY3Q96HD9 319 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 FAM210BQ96KR6 192 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 NPCDR1Q9BY65 106 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 OR2D2Q9H210 308 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 PLEKHA3Q9HB20 300 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 NPVFQ9HCQ7 196 aa4.6□□□□□ -1.67
PTPRK-211ENST00000429595 FKBP11Q9NYL4 201 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms