RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CCDC190Q86UF4 302 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 LINC00612Q8N6U2 182 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 DPH3Q96FX2 82 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 CENPNQ96H22 339 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-203ENST00000424270 PAXXQ9BUH6 204 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 SLC25A22Q9H936 323 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 PRO0255Q9UI72 69 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 HHLA3Q9XRX5 114 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-203ENST00000424270 DNAH8Q96JB1 4490 aa4.14□□□□□ -1.75
SDCBP-203ENST00000424270 TRAV8-6A0A0B4J262 113 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 TRGV4A0A0C4DH28 118 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 EFCAB10A6NFE3 127 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 IBA57-AS1B1ANH7 110 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 PTGES3LE9PB15 166 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 ZNF561-AS1K7EIQ3 104 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 TSC22D2O75157 780 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 ARL6IP5O75915 188 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 TNFRSF6BO95407 300 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 ATP6V1G2O95670 118 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 TOMM40O96008 361 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 RNASE2P10153 161 aaKnown RBP4.13□□□□□ -1.75
SDCBP-203ENST00000424270 PSG1P11464 419 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 SLC25A4P12235 298 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 RPS25P62851 125 aaKnown RBP4.13□□□□□ -1.75
SDCBP-203ENST00000424270 SLAQ13239 276 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 DNAL1Q4LDG9 190 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 OR10J3Q5JRS4 329 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 RNF182Q8N6D2 247 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 Q8N976 141 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 NHLRC2Q8NBF2 726 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 BEST4Q8NFU0 473 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 LRRC20Q8TCA0 184 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 BAALCQ8WXS3 180 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 TXNDC17Q9BRA2 123 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 RSG1Q9BU20 258 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 EXTL2Q9UBQ6 330 aa4.13□□□□□ -1.75
SDCBP-203ENST00000424270 LOC100130705A0A1B0GUX0 176 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 PITX3O75364 302 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 PGLYRP1O75594 196 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-203ENST00000424270 CD1AP06126 327 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 CLEC2LP0C7M8 214 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 C1orf194Q5T5A4 169 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 OR8G2PQ6IF36 304 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 ETFRF1Q6IPR1 90 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 PET117Q6UWS5 81 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 SPARTQ8N0X7 666 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 ZBTB8BQ8NAP8 495 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-203ENST00000424270 ZNF555Q8NEP9 628 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 RNASE11Q8TAA1 199 aaKnown RBP4.12□□□□□ -1.75
SDCBP-203ENST00000424270 APH1BQ8WW43 257 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 NRG4Q8WWG1 115 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 NPIPB3Q92617 1050 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 MRGPRFQ96AM1 343 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 LINC01600Q96MT4 127 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 FAM210AQ96ND0 272 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 SLC25A31Q9H0C2 315 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 V9GY05 133 aa4.12□□□□□ -1.75
SDCBP-203ENST00000424270 ZFP92A6NM28 416 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 A8MTW9 85 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 K7EQD1 137 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 CIB2O75838 187 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 FABP1P07148 127 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 UCHL1P09936 223 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 GATA2P23769 480 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-203ENST00000424270 RPL5P46777 297 aaKnown RBP4.11□□□□□ -1.75
SDCBP-203ENST00000424270 AKR1C2P52895 323 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 CRYBA4P53673 196 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 OR2F1Q13607 317 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 PHLDA2Q53GA4 152 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 PRSS54Q6PEW0 395 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 THAP8Q8NA92 274 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 SLC24A4Q8NFF2 622 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 ATP6V0E2Q8NHE4 81 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 BLNKQ8WV28 456 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 GFI1Q99684 422 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 SPXQ9BT56 116 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 HEYLQ9NQ87 328 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-203ENST00000424270 GSN-AS1Q9NRJ2 163 aa4.11□□□□□ -1.75
SDCBP-203ENST00000424270 TRAV8-3A0A0A6YYJ7 113 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 TRAV12-3A0A0B4J271 114 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 CRYM-AS1A6NIL9 109 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 PDCD5O14737 125 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 ORM1P02763 201 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 HSMCR30P0CW71 290 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 HTR2BP41595 481 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 DAZ2Q13117 558 aaKnown RBP4.1□□□□□ -1.75
SDCBP-203ENST00000424270 IZUMO4Q1ZYL8 232 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 TRIM16LQ309B1 348 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 LINC01556Q5JQF7 62 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 C1orf146Q5VVC0 180 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 STEAP1BQ6NZ63 245 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 REG3GQ6UW15 175 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 ZNF680Q8NEM1 530 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 OR8A1Q8NGG7 326 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 UFD1Q92890 307 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 ST6GAL2Q96JF0 529 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 C20orf144Q9BQM9 153 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 EHFQ9NZC4 300 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms