RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 FCN3O75636 299 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 WNT2P09544 360 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 ARHGEF17Q96PE2 2063 aaPredicted RBP9.82□□□□□ -0.84
UBR4-205ENST00000417040 KNTC1P50748 2209 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 LINC00477Q96M19 166 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 PTPRDP23468 1912 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 TNS1Q9HBL0 1735 aaKnown RBP9.82□□□□□ -0.84
UBR4-205ENST00000417040 K7ERJ3 54 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 ITGB1BP1O14713 200 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 CITED1Q99966 193 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 IGLV3-12A0A075B6K2 115 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 WIPF3A6NGB9 483 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 SRRM4A7MD48 611 aaKnown RBP9.81□□□□□ -0.84
UBR4-205ENST00000417040 NSUN5P1Q3KNT7 163 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 TMEM105Q8N8V8 129 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 RSPO3Q9BXY4 272 aaPredicted RBP9.81□□□□□ -0.84
UBR4-205ENST00000417040 PEMTQ9UBM1 199 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.81□□□□□ -0.84
UBR4-205ENST00000417040 IGHV1-8P0DP01 117 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 UCNP55089 124 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 ASCL4Q6XD76 172 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 C18orf32Q8TCD1 76 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 IGKV1-16P04430 117 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 SRSF8Q9BRL6 282 aaKnown RBP9.81□□□□□ -0.84
UBR4-205ENST00000417040 TEX43Q6ZNM6 134 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 TRGV9Q99603 122 aa9.81□□□□□ -0.84
UBR4-205ENST00000417040 TRGV11A0A075B6L2 103 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 OVOL1O14753 267 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 Q86TA4 180 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 ZNF114Q8NC26 417 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 Q0VFX4 171 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 FHL1Q13642 323 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 DNAJC13O75165 2243 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 LTBRP36941 435 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 SLAQ13239 276 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 A0A1B0GWJ7 208 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 IL18BPO95998 194 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 CRPP02741 224 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 LGALS1P09382 135 aaKnown RBP9.8□□□□□ -0.84
UBR4-205ENST00000417040 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.8□□□□□ -0.84
UBR4-205ENST00000417040 WISP1O95388 367 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 LYPD2Q6UXB3 125 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 GAFA1Q96PS6 74 aa9.8□□□□□ -0.84
UBR4-205ENST00000417040 LOC102723996A0A087X1L8 192 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 TRAV41A0A0B4J266 112 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 IGHV1-24A0A0C4DH33 117 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 THBDP07204 575 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 PFN1P07737 140 aaKnown RBP9.79□□□□□ -0.84
UBR4-205ENST00000417040 ZNF688P0C7X2 276 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 DOCK3Q8IZD9 2030 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 TRAV13-1A0A0B4J241 112 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 HAPLN4Q86UW8 402 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 FREM3P0C091 2139 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 IGKV1-6A0A0C4DH72 117 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 MORN3Q6PF18 240 aaPredicted RBP9.79□□□□□ -0.84
UBR4-205ENST00000417040 IGKV1D-17A0A075B6S4 117 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 Q0VG73 95 aa9.79□□□□□ -0.84
UBR4-205ENST00000417040 C9orf118A6NHY6 69 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 RNASE2P10153 161 aaKnown RBP9.78□□□□□ -0.84
UBR4-205ENST00000417040 LIME1Q9H400 295 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 GAGE1Q13065 139 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 LY96Q9Y6Y9 160 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 KIF26BQ2KJY2 2108 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 DUSP14O95147 198 aaKnown RBP9.78□□□□□ -0.84
UBR4-205ENST00000417040 IGLL1P15814 213 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 BRD3OSQ6XYD6 125 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 SRRM5B3KS81 715 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 IGHV2-5P01817 119 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 RPL35AP18077 110 aaKnown RBP9.78□□□□□ -0.84
UBR4-205ENST00000417040 MRPL52Q86TS9 123 aaKnown RBP9.78□□□□□ -0.84
UBR4-205ENST00000417040 PLEKHB2Q96CS7 222 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 C20orf144Q9BQM9 153 aa9.78□□□□□ -0.84
UBR4-205ENST00000417040 TRGV1A0A0A0MS02 117 aa9.77□□□□□ -0.84
UBR4-205ENST00000417040 PAX9P55771 341 aa9.77□□□□□ -0.84
UBR4-205ENST00000417040 TNFRSF14Q92956 283 aa9.77□□□□□ -0.84
UBR4-205ENST00000417040 ALPK2Q86TB3 2170 aa9.77□□□□□ -0.84
UBR4-205ENST00000417040 IGLC2P0DOY2 106 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 IGLC3P0DOY3 106 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 C9orf153Q5TBE3 101 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 UBE2E2Q96LR5 201 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 LY6HO94772 140 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 IL17RELQ6ZVW7 336 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 NEGR1Q7Z3B1 354 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 TMEM86BQ8N661 226 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 C1orf159Q96HA4 380 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 TIMM21Q9BVV7 248 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 JPT2Q9H910 190 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 KLF12Q9Y4X4 402 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 MYLKQ15746 1914 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 SCN10AQ9Y5Y9 1956 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 SLC25A16P16260 332 aa9.77□□□□□ -0.85
UBR4-205ENST00000417040 DKK1O94907 266 aa9.76□□□□□ -0.85
UBR4-205ENST00000417040 VWC2Q2TAL6 325 aa9.76□□□□□ -0.85
UBR4-205ENST00000417040 TMEM178BH3BS89 294 aa9.76□□□□□ -0.85
UBR4-205ENST00000417040 VCYO14598 125 aa9.76□□□□□ -0.85
UBR4-205ENST00000417040 UNQ6494/PRO21346Q6UXR6 183 aa9.76□□□□□ -0.85
UBR4-205ENST00000417040 RNASE6Q93091 150 aaKnown RBP9.76□□□□□ -0.85
UBR4-205ENST00000417040 BUB1B-PAK6H3BSN5 160 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms