RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TRGV8A0A0C4DH27 118 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1-12A0A0C4DH73 117 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 A0A1B0GV50 99 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 FAM240AA0A1B0GVK7 77 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 A0A1W2PNU3 283 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR4C46A6NHA9 309 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 K7EQG2 157 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 K7ERU9 68 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 ISLRO14498 428 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF207O43670 478 aaKnown RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR7C1O76099 320 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 TNFSF15O95150 251 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1D-12P01611 117 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 HLA-DRB1P01911 266 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR5AL1P0C617 328 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 LINC00869P0C866 280 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 P0C879 139 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 CT45A6P0DMU7 189 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 CT45A5P0DMU8 189 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 CT45A7P0DMV0 189 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGLC2P0DOY2 106 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGLC3P0DOY3 106 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 USF1P22415 310 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 NPY1RP25929 384 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 OPRK1P41145 380 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 FABP6P51161 128 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 HNRNPA3P51991 378 aaKnown RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 DSCR4P56555 118 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 SMAGPQ0VAQ4 97 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 CATR1Q13166 79 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 DEFB110Q30KQ9 67 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 LRRC10Q5BKY1 277 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 CT45A1Q5HYN5 189 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 TSPO2Q5TGU0 170 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 MRPL54Q6P161 138 aaKnown RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 PRR22Q8IZ63 422 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 C11orf42Q8N5U0 333 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 CT45A3Q8NHU0 189 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 SGMS2Q8NHU3 365 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 RDH5Q92781 318 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 APOBEC3DQ96AK3 386 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 STARD4Q96DR4 205 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF414Q96IQ9 312 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 KCNS1Q96KK3 526 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 PMCHL2Q9BQD1 86 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 EMC6Q9BV81 110 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 NPCDR1Q9BY65 106 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 SAMD10Q9BYL1 202 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 SLC25A39Q9BZJ4 359 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 LINC00470Q9BZP3 86 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 FBXL15Q9H469 300 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 ST20Q9HBF5 79 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 OSTCQ9NRP0 149 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 MPC1Q9Y5U8 109 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 GOLGA4Q13439 2230 aaKnown RBP2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 SPTBP11277 2137 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 ATG2AQ2TAZ0 1938 aa2.74□□□□□ -1.97
HMGB3P23-201ENST00000414981 TRAV9-2A0A087WT02 112 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 A0A087WX48 190 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGHV5-51A0A0C4DH38 117 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 A0A1W2PRE2 83 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 DPRXA6NFQ7 191 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 LYRM9A8MSI8 78 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 TRAPPC2LH3BP13 241 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 RBFOX2O43251 390 aaKnown RBP eCLIP2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 TCF21O43680 179 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 HYPMO75409 117 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF324O75467 553 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 SERF1AO75920 110 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1D-33P01593 117 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1-33P01594 117 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1-5P01602 117 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 CD55P08174 381 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 TSPOP30536 169 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 GABRA2P47869 451 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 SUB1P53999 127 aaKnown RBP eCLIP2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 TCTAP57738 103 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 PPP1CAP62136 330 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 PLGLB1Q02325 96 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF90Q03938 601 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 TMEM267Q0VDI3 215 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 PIGYQ3MUY2 71 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 SPATA45Q537H7 98 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 SPANXN5Q5MJ07 72 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 REG3GQ6UW15 175 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 Q6ZN92 141 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 LRP11Q86VZ4 500 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 BAGE3Q86Y29 109 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 BAGE2Q86Y30 109 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 DOLPP1Q86YN1 238 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 SLC22A18ASQ8N1D0 253 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 TMEM256Q8N2U0 113 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 MUC15Q8N387 334 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF645Q8N7E2 425 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZIC4Q8N9L1 334 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR4S2Q8NH73 311 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR13C6PQ8NH95 151 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 PATE1Q8WXA2 126 aa2.73□□□□□ -1.97
HMGB3P23-201ENST00000414981 PSMF1Q92530 271 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms