RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TMEM252Q8N6L7 170 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 C16orf92Q96LL3 132 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 SLC50A1Q9BRV3 221 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 SHANK2-AS3Q9BTD1 123 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 SLC25A39Q9BZJ4 359 aaPredicted RBP4.69□□□□□ -1.66
USP54-202ENST00000413442 WFDC10AQ9H1F0 79 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 SAV1Q9H4B6 383 aaPredicted RBP4.69□□□□□ -1.66
USP54-202ENST00000413442 C11orf1Q9H5F2 150 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 RCL1Q9Y2P8 373 aaKnown RBP4.69□□□□□ -1.66
USP54-202ENST00000413442 HLA-DRB4X5D2U9 266 aa4.69□□□□□ -1.66
USP54-202ENST00000413442 A8MTW9 85 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 C17orf112F2Z3M2 114 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 H3BP45 60 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 H3BRN7 92 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 SOCS3O14543 225 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 ZNF253O75346 499 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 JTBO76095 146 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 CA1P00915 261 aaPredicted RBP4.68□□□□□ -1.66
USP54-202ENST00000413442 OR5G3P0C626 314 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 PRR20EP86478 221 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 PRR20CP86479 221 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 PRR20DP86480 221 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 PRR20BP86481 221 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 PRR20AP86496 221 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 FGL1Q08830 312 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 SLC38A11Q08AI6 406 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 OR2F1Q13607 317 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 RAB32Q13637 225 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 DEFB135Q30KP9 77 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 ACTL10Q5JWF8 245 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 LEMD1Q68G75 181 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 LCN15Q6UWW0 184 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 ZNF709Q8N972 641 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 CSNK1G2-AS1Q8NCQ2 148 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 OR11H2Q8NH07 326 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 LRRC20Q8TCA0 184 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 C20orf144Q9BQM9 153 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 SEC22CQ9BRL7 303 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 RSG1Q9BU20 258 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 ARL6Q9H0F7 186 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 ARV1Q9H2C2 271 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 PRELID1Q9Y255 219 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 LSM5Q9Y4Y9 91 aaKnown RBP4.68□□□□□ -1.66
USP54-202ENST00000413442 PXMP4Q9Y6I8 212 aa4.68□□□□□ -1.66
USP54-202ENST00000413442 DNAH9Q9NYC9 4486 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 TENM3Q9P273 2699 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 A0A0J9YX75 114 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 FAM24AA6NFZ4 105 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 COX7A2P2O60397 106 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 PSG9Q00887 426 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 IFITM3Q01628 133 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 PDE6HQ13956 83 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 C10orf113Q5VZT2 155 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 CEMP1Q6PRD7 247 aaPredicted RBP4.67□□□□□ -1.66
USP54-202ENST00000413442 LINC00305Q7Z4B0 112 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 TMEM256Q8N2U0 113 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 C11orf45Q8TAV5 145 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 LINC00052Q96N35 136 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 PARD6GQ9BYG4 376 aaPredicted RBP4.67□□□□□ -1.66
USP54-202ENST00000413442 TMEM14CQ9P0S9 112 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 DOK5Q9P104 306 aa4.67□□□□□ -1.66
USP54-202ENST00000413442 A0A0J9YWU9 116 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 LCE6AA0A183 80 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 CCSO14618 274 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 SSNA1O43805 119 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 CST7O76096 145 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 MPC2O95563 127 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 TSPOP30536 169 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 S100A10P60903 97 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 RRAS2P62070 204 aaPredicted RBP4.66□□□□□ -1.66
USP54-202ENST00000413442 OXA1LQ15070 435 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 PSG3Q16557 428 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 PATE2Q6UY27 113 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 ZNF705AQ6ZN79 300 aaPredicted RBP4.66□□□□□ -1.66
USP54-202ENST00000413442 TMEM182Q6ZP80 229 aaPredicted RBP4.66□□□□□ -1.66
USP54-202ENST00000413442 LYPD1Q8N2G4 141 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 FAM24BQ8N5W8 94 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 ARL6IP6Q8N6S5 226 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 THAP6Q8TBB0 222 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 PPP1R1CQ8WVI7 109 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 MRPL53Q96EL3 112 aaKnown RBP4.66□□□□□ -1.66
USP54-202ENST00000413442 FAM210BQ96KR6 192 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 MGST2Q99735 147 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 SLC25A32Q9H2D1 315 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 SLC25A22Q9H936 323 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 SLC39A9Q9NUM3 307 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 GOLT1BQ9Y3E0 138 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 SELENOKQ9Y6D0 94 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 NBEAL2Q6ZNJ1 2754 aa4.66□□□□□ -1.66
USP54-202ENST00000413442 TRBV7-9A0A0J9YWB2 115 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 CXorf65A6NEN9 183 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 KNCNA6PVL3 124 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 ZNF705FA8MVS1 300 aaPredicted RBP4.65□□□□□ -1.67
USP54-202ENST00000413442 IFNA5P01569 189 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 NMBP08949 121 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 GIG44P09565 113 aaPredicted RBP4.65□□□□□ -1.67
USP54-202ENST00000413442 ZNF705DP0CH99 300 aaPredicted RBP4.65□□□□□ -1.67
USP54-202ENST00000413442 ZNF705BP0CI00 300 aaPredicted RBP4.65□□□□□ -1.67
USP54-202ENST00000413442 SPART-AS1P0CW21 52 aa4.65□□□□□ -1.67
USP54-202ENST00000413442 HIST1H1EP10412 219 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms