RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 DNAH9Q9NYC9 4486 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 NOTCH3Q9UM47 2321 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 TOMM40O96008 361 aa13.34□□□□□ -0.27
PTPRC-206ENST00000413409 HIST1H1BP16401 226 aaKnown RBP13.34□□□□□ -0.27
PTPRC-206ENST00000413409 ORM2P19652 201 aa13.34□□□□□ -0.27
PTPRC-206ENST00000413409 RPL35P42766 123 aaKnown RBP13.34□□□□□ -0.27
PTPRC-206ENST00000413409 TIGITQ495A1 244 aa13.34□□□□□ -0.27
PTPRC-206ENST00000413409 BTF3L4Q96K17 158 aa13.34□□□□□ -0.27
PTPRC-206ENST00000413409 THYN1Q9P016 225 aa13.34□□□□□ -0.27
PTPRC-206ENST00000413409 GGCTO75223 188 aaKnown RBP13.33□□□□□ -0.28
PTPRC-206ENST00000413409 SCGB2A1O75556 95 aa13.33□□□□□ -0.28
PTPRC-206ENST00000413409 PYYP10082 97 aa13.33□□□□□ -0.28
PTPRC-206ENST00000413409 PSG1P11464 419 aa13.33□□□□□ -0.28
PTPRC-206ENST00000413409 GP9P14770 177 aa13.33□□□□□ -0.28
PTPRC-206ENST00000413409 YPEL3P61236 119 aaPredicted RBP13.33□□□□□ -0.28
PTPRC-206ENST00000413409 KCNIP4Q6PIL6 250 aa13.33□□□□□ -0.28
PTPRC-206ENST00000413409 SFRP2Q96HF1 295 aa13.33□□□□□ -0.28
PTPRC-206ENST00000413409 TMEM68Q96MH6 324 aa13.33□□□□□ -0.28
PTPRC-206ENST00000413409 TMEM14CQ9P0S9 112 aa13.33□□□□□ -0.28
PTPRC-206ENST00000413409 RNF114Q9Y508 228 aa13.33□□□□□ -0.28
PTPRC-206ENST00000413409 RD3LP0DJH9 198 aa13.32□□□□□ -0.28
PTPRC-206ENST00000413409 EGR2P11161 476 aaPredicted RBP13.32□□□□□ -0.28
PTPRC-206ENST00000413409 CRYBB3P26998 211 aa13.32□□□□□ -0.28
PTPRC-206ENST00000413409 FCGR2BP31994 310 aaPredicted RBP13.32□□□□□ -0.28
PTPRC-206ENST00000413409 MFAP4P55083 255 aa13.32□□□□□ -0.28
PTPRC-206ENST00000413409 LYZP61626 148 aa13.32□□□□□ -0.28
PTPRC-206ENST00000413409 TEX38Q6PEX7 206 aa13.32□□□□□ -0.28
PTPRC-206ENST00000413409 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
PTPRC-206ENST00000413409 S100A7AQ86SG5 101 aa13.32□□□□□ -0.28
PTPRC-206ENST00000413409 ELOVL1Q9BW60 279 aa13.32□□□□□ -0.28
PTPRC-206ENST00000413409 SAV1Q9H4B6 383 aaPredicted RBP13.32□□□□□ -0.28
PTPRC-206ENST00000413409 MYCNOSP40205 109 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 GNG4P50150 75 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 PROK1P58294 105 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 TAS2R60P59551 318 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 DEFB112Q30KQ8 113 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 CENPWQ5EE01 88 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 ZNF329Q86UD4 541 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 LINC01006Q8NI28 216 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 TXN2Q99757 166 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 MEGF9Q9H1U4 602 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 PRDM13Q9H4Q3 707 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 SRD5A3Q9H8P0 318 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 MRPL27Q9P0M9 148 aaKnown RBP13.31□□□□□ -0.28
PTPRC-206ENST00000413409 MOB4Q9Y3A3 225 aa13.31□□□□□ -0.28
PTPRC-206ENST00000413409 TRAV40A0A0B4J280 105 aa13.3□□□□□ -0.28
PTPRC-206ENST00000413409 HELTA6NFD8 242 aa13.3□□□□□ -0.28
PTPRC-206ENST00000413409 TYMSP04818 313 aa13.3□□□□□ -0.28
PTPRC-206ENST00000413409 S100A6P06703 90 aa13.3□□□□□ -0.28
PTPRC-206ENST00000413409 SUMO1P63165 101 aaKnown RBP13.3□□□□□ -0.28
PTPRC-206ENST00000413409 OCC1Q8TAD7 63 aa13.3□□□□□ -0.28
PTPRC-206ENST00000413409 VN1R17PQ8TDU5 208 aa13.3□□□□□ -0.28
PTPRC-206ENST00000413409 IGF2BP2-AS1Q96M15 143 aa13.3□□□□□ -0.28
PTPRC-206ENST00000413409 SLC25A39Q9BZJ4 359 aaPredicted RBP13.3□□□□□ -0.28
PTPRC-206ENST00000413409 C21orf62Q9NYP8 219 aa13.3□□□□□ -0.28
PTPRC-206ENST00000413409 DYNC2H1Q8NCM8 4307 aaKnown RBP13.29□□□□□ -0.28
PTPRC-206ENST00000413409 TRAV9-1A0A075B6T8 112 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 WI2-2373I1.2A0A1W2PRP0 233 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 PGPEP1LA6NFU8 196 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 C5orf52A6NGY3 159 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 H3BRN7 92 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 PEX7O00628 323 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 UBE2CO00762 179 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 GNG7O60262 68 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 CNN1P51911 297 aaKnown RBP13.29□□□□□ -0.28
PTPRC-206ENST00000413409 CRIP2P52943 208 aaPredicted RBP13.29□□□□□ -0.28
PTPRC-206ENST00000413409 C5orf56Q8N8D9 126 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 OR5T1Q8NG75 326 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 OR10G8Q8NGN5 311 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 HSPB9Q9BQS6 159 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 SHANK2-AS3Q9BTD1 123 aa13.29□□□□□ -0.28
PTPRC-206ENST00000413409 F8W735 103 aaPredicted RBP13.28□□□□□ -0.28
PTPRC-206ENST00000413409 K7EN84 100 aa13.28□□□□□ -0.28
PTPRC-206ENST00000413409 NECAP1Q8NC96 275 aa13.28□□□□□ -0.28
PTPRC-206ENST00000413409 RNF125Q96EQ8 232 aa13.28□□□□□ -0.28
PTPRC-206ENST00000413409 RNF24Q9Y225 148 aa13.28□□□□□ -0.28
PTPRC-206ENST00000413409 AP4M1O00189 453 aa13.27□□□□□ -0.29
PTPRC-206ENST00000413409 ATP6V0E1O15342 81 aa13.27□□□□□ -0.29
PTPRC-206ENST00000413409 NDUFB8O95169 186 aa13.27□□□□□ -0.29
PTPRC-206ENST00000413409 NBEAP1P0C6P0 100 aa13.27□□□□□ -0.29
PTPRC-206ENST00000413409 FAM3BP58499 235 aaPredicted RBP13.27□□□□□ -0.29
PTPRC-206ENST00000413409 SMUG1Q53HV7 270 aa13.27□□□□□ -0.29
PTPRC-206ENST00000413409 ZNF491Q8N8L2 437 aa13.27□□□□□ -0.29
PTPRC-206ENST00000413409 PPP5D1E7EU14 171 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 PHOX2AO14813 284 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 OR2J3O76001 311 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 GCGP01275 180 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 S100A9P06702 114 aaKnown RBP13.26□□□□□ -0.29
PTPRC-206ENST00000413409 HIST1H1EP10412 219 aaKnown RBP13.26□□□□□ -0.29
PTPRC-206ENST00000413409 Q56UQ5 140 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 UNQ5815/PRO19632Q6UWF5 114 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 BRD3OSQ6XYD6 125 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 ZNF600Q6ZNG1 722 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 C5orf17Q8NAS9 161 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 OTORQ9NRC9 128 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 OSTCQ9NRP0 149 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 AURKAIP1Q9NWT8 199 aaPredicted RBP13.26□□□□□ -0.29
PTPRC-206ENST00000413409 FBXL7Q9UJT9 491 aa13.26□□□□□ -0.29
PTPRC-206ENST00000413409 A0A0U1RQK1 487 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms