RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ATP6V0E1O15342 81 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 LMX1BO60663 402 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 CDS2O95674 445 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 IFNA1P01562 189 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 TTRP02766 147 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 CD55P08174 381 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 RPL35AP18077 110 aaKnown RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 USF1P22415 310 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 RPL12P30050 165 aaKnown RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 FCGR2CP31995 323 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 HINT1P49773 126 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 NANOS3P60323 173 aaKnown RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 HERV-K104P61576 105 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 RHOBP62745 196 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 SEC11AP67812 179 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 RPL24P83731 157 aaKnown RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 SMAGPQ0VAQ4 97 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 POU2AF1Q16633 256 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 TMEM128Q5BJH2 165 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 WDR38Q5JTN6 314 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 BVES-AS1Q5T3Y7 98 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF684Q5T5D7 378 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 FAM78BQ5VT40 261 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 WDR25Q64LD2 544 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 PVRIGQ6DKI7 326 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 SUMO4Q6EEV6 95 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 CYP2G1PQ6ZSU1 146 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF826PQ6ZT77 177 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 Q6ZVH6 145 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 WDR86Q86TI4 376 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 OR8I2Q8N0Y5 310 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 CYB561D1Q8N8Q1 229 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF709Q8N972 641 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 OR13G1Q8NGZ3 307 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 CMTM2Q8TAZ6 248 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 LINC00476Q8WZB0 136 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 DERL3Q96Q80 235 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 SLC25A33Q9BSK2 321 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 TM2D1Q9BX74 207 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 NPVFQ9HCQ7 196 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 TP53TG3Q9ULZ0 132 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 UFC1Q9Y3C8 167 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 SELENOKQ9Y6D0 94 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 R4GMQ9 66 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 NSD1Q96L73 2696 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 FN1P02751 2386 aaKnown RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 DNHD1Q96M86 4753 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 NIPBLQ6KC79 2804 aaeCLIP3.6□□□□□ -1.83
SF3B1-202ENST00000409915 IGHV3OR15-7A0A075B7D8 119 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 TRAV9-2A0A087WT02 112 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 A0A087WX48 190 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 IGLV9-49A0A0B4J1Y8 123 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 TRAV8-6A0A0B4J262 113 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 OR2T8A6NH00 312 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 INAFM1C9JVW0 142 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 H0YJW9 148 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-202ENST00000409915 NUPR1O60356 82 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF253O75346 499 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 DEDDO75618 318 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 VENTXO95231 258 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 SFT2D2O95562 160 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 NUDT3O95989 172 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 OXTP01178 125 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 IGLV3-1P01715 115 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 TFF1P04155 84 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 GPX1P07203 203 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 PPP1CCP36873 323 aaKnown RBP3.6□□□□□ -1.83
SF3B1-202ENST00000409915 HILS1P60008 231 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 RPL31P62899 125 aaKnown RBP3.6□□□□□ -1.83
SF3B1-202ENST00000409915 MEF2BQ02080 365 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-202ENST00000409915 LOXL1Q08397 574 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-202ENST00000409915 FOXI1Q12951 378 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 OR8B8Q15620 311 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 MSMO1Q15800 293 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 MPV17LQ2QL34 196 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 HOGA1Q86XE5 327 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 VKORC1L1Q8N0U8 176 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 TMEM256Q8N2U0 113 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 OR51A4Q8NGJ6 313 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 OR2T10Q8NGZ9 312 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 OR10AC1Q8NH08 325 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 OR8S1Q8NH09 359 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 IL1F10Q8WWZ1 152 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 URB1-AS1Q96HZ7 61 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 C2orf48Q96LS8 159 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 RARRES2Q99969 163 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 HSPB9Q9BQS6 159 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 LPAR5Q9H1C0 372 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 GTSF1LQ9H1H1 148 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 ST20Q9HBF5 79 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 NAT8BQ9UHF3 227 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 HSPB8Q9UJY1 196 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 VPREB3Q9UKI3 123 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 SETD2Q9BYW2 2564 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-202ENST00000409915 ABCA1O95477 2261 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 TANC2Q9HCD6 1990 aa3.6□□□□□ -1.83
SF3B1-202ENST00000409915 NAV3Q8IVL0 2385 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 CUBNO60494 3623 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 HIVEP2P31629 2446 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms