RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 HBBP68871 147 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 MINOS1Q5TGZ0 78 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 PRNTQ86SH4 94 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 FANCD2OSQ96PS1 177 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 GFRA4Q9GZZ7 299 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 MINOS1-NBL1R4GNA1 71 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 S4R3C0 116 aa13.27□□□□□ -0.29
NUP50-203ENST00000407019 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
NUP50-203ENST00000407019 MFAP4P55083 255 aa13.26□□□□□ -0.29
NUP50-203ENST00000407019 KLF5Q13887 457 aaPredicted RBP13.26□□□□□ -0.29
NUP50-203ENST00000407019 S100A7AQ86SG5 101 aa13.26□□□□□ -0.29
NUP50-203ENST00000407019 Q8N6K4 173 aa13.26□□□□□ -0.29
NUP50-203ENST00000407019 GTSF1Q8WW33 167 aa13.26□□□□□ -0.29
NUP50-203ENST00000407019 ZNF48Q96MX3 618 aaPredicted RBP13.26□□□□□ -0.29
NUP50-203ENST00000407019 SSBP4Q9BWG4 385 aaPredicted RBP13.26□□□□□ -0.29
NUP50-203ENST00000407019 A0A1B0GV90 55 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 A0A1W2PPR1 153 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 NPIPB6E9PJ23 425 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 ZFP36P26651 326 aaKnown RBP13.25□□□□□ -0.29
NUP50-203ENST00000407019 NDPQ00604 133 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 LYPD1Q8N2G4 141 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 CIARTQ8N365 385 aaPredicted RBP13.25□□□□□ -0.29
NUP50-203ENST00000407019 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 C20orf144Q9BQM9 153 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 VAMP8Q9BV40 100 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 SPTA1P02549 2419 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 COL8A1P27658 744 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 FCGR2BP31994 310 aaPredicted RBP13.25□□□□□ -0.29
NUP50-203ENST00000407019 EBI3Q14213 229 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 SIGLEC15Q6ZMC9 328 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 OR4B1Q8NGF8 309 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 PGLYRP4Q96LB8 373 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 C17orf77Q96MU5 243 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 ALKBH7Q9BT30 221 aaPredicted RBP13.25□□□□□ -0.29
NUP50-203ENST00000407019 ZZEF1O43149 2961 aa13.25□□□□□ -0.29
NUP50-203ENST00000407019 ABCA4P78363 2273 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 TPRP12270 2363 aaKnown RBP13.24□□□□□ -0.29
NUP50-203ENST00000407019 DIRC3C9JPN6 131 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 MRPS12O15235 138 aaKnown RBP13.24□□□□□ -0.29
NUP50-203ENST00000407019 TMEM11P17152 192 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 RBPMS2Q6ZRY4 209 aaKnown RBP13.24□□□□□ -0.29
NUP50-203ENST00000407019 TMEM75Q8N9X5 138 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 OR2D3Q8NGH3 330 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 SIRPDQ9H106 197 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 ARHGAP32A7KAX9 2087 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 FAM231BA6NCW3 169 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 K7EQM0 130 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 TDRG1Q3Y452 100 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 Q56UQ5 140 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 NIT1Q86X76 327 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 Q8N976 141 aa13.24□□□□□ -0.29
NUP50-203ENST00000407019 NDUFS7O75251 213 aa13.23□□□□□ -0.29
NUP50-203ENST00000407019 NTF3P20783 257 aa13.23□□□□□ -0.29
NUP50-203ENST00000407019 FAM19A2Q8N3H0 131 aa13.23□□□□□ -0.29
NUP50-203ENST00000407019 ZNF414Q96IQ9 312 aa13.23□□□□□ -0.29
NUP50-203ENST00000407019 UBTD1Q9HAC8 227 aa13.23□□□□□ -0.29
NUP50-203ENST00000407019 C21orf62Q9NYP8 219 aa13.23□□□□□ -0.29
NUP50-203ENST00000407019 THYN1Q9P016 225 aa13.23□□□□□ -0.29
NUP50-203ENST00000407019 PAM16Q9Y3D7 125 aa13.23□□□□□ -0.29
NUP50-203ENST00000407019 IGF2RP11717 2491 aa13.23□□□□□ -0.29
NUP50-203ENST00000407019 F8W735 103 aaPredicted RBP13.22□□□□□ -0.29
NUP50-203ENST00000407019 EREGO14944 169 aa13.22□□□□□ -0.29
NUP50-203ENST00000407019 ZFP30Q9Y2G7 519 aa13.22□□□□□ -0.29
NUP50-203ENST00000407019 HSBP1O75506 76 aa13.22□□□□□ -0.29
NUP50-203ENST00000407019 C16orf54Q6UWD8 224 aa13.22□□□□□ -0.29
NUP50-203ENST00000407019 LY6DQ14210 128 aa13.21□□□□□ -0.29
NUP50-203ENST00000407019 Q71RC1 249 aaPredicted RBP13.21□□□□□ -0.29
NUP50-203ENST00000407019 BORCS7Q96B45 105 aa13.21□□□□□ -0.29
NUP50-203ENST00000407019 PSG8Q9UQ74 426 aa13.21□□□□□ -0.29
NUP50-203ENST00000407019 LRBAP50851 2863 aa13.21□□□□□ -0.29
NUP50-203ENST00000407019 IGHV2-70DA0A0C4DH43 119 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 C3orf79P0CE67 100 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 PDE6HQ13956 83 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 PSG3Q16557 428 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 RNASEKQ6P5S7 137 aaKnown RBP13.2□□□□□ -0.3
NUP50-203ENST00000407019 BCL6BQ8N143 479 aaPredicted RBP13.2□□□□□ -0.3
NUP50-203ENST00000407019 ZC2HC1AQ96GY0 325 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 MIEN1Q9BRT3 115 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 DCHS2Q6V1P9 2916 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 NDUFB8O95169 186 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 EFNA4P52798 201 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 ZNF705AQ6ZN79 300 aaPredicted RBP13.2□□□□□ -0.3
NUP50-203ENST00000407019 SNHG12Q9BXW3 62 aa13.2□□□□□ -0.3
NUP50-203ENST00000407019 IGHV7-81A0A0B4J1V7 117 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 M0R143 59 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 IGHV3-23P01764 117 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 FAM106CPP0CH98 169 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 EGR2P11161 476 aaPredicted RBP13.19□□□□□ -0.3
NUP50-203ENST00000407019 Q8N9W7 124 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 AAMDCQ9H7C9 122 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 C1RLQ9NZP8 487 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 RELNP78509 3460 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 SFTPCP11686 197 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 PRR31Q5SQ13 230 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 FAM162BQ5T6X4 162 aa13.19□□□□□ -0.3
NUP50-203ENST00000407019 ZNF785A8K8V0 405 aa13.18□□□□□ -0.3
NUP50-203ENST00000407019 M0R2Z0 102 aa13.18□□□□□ -0.3
NUP50-203ENST00000407019 M0R3E3 92 aa13.18□□□□□ -0.3
NUP50-203ENST00000407019 CHEK1O14757 476 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms