RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ZNF253O75346 499 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 P01737 135 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 NHLRC2Q8NBF2 726 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 FAM168AQ92567 244 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 SPOCK3Q9BQ16 436 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 ARHGAP32A7KAX9 2087 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 NPIPB6E9PJ23 425 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 F8W735 103 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 KLF17Q5JT82 389 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 BAGE3Q86Y29 109 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 NUP35Q8NFH5 326 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 ZNF414Q96IQ9 312 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 AAMDCQ9H7C9 122 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 FBXL7Q9UJT9 491 aa13.9□□□□□ -0.18
HLA-DQB1-204ENST00000399084 LINC00587B1AMM8 73 aa13.89□□□□□ -0.19
HLA-DQB1-204ENST00000399084 APCSP02743 223 aa13.89□□□□□ -0.19
HLA-DQB1-204ENST00000399084 SIGLEC15Q6ZMC9 328 aa13.89□□□□□ -0.19
HLA-DQB1-204ENST00000399084 Q86TA4 180 aa13.89□□□□□ -0.19
HLA-DQB1-204ENST00000399084 SPTBN1Q01082 2364 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-204ENST00000399084 CTSGP08311 255 aa13.88□□□□□ -0.19
HLA-DQB1-204ENST00000399084 TCL1AP56279 114 aa13.88□□□□□ -0.19
HLA-DQB1-204ENST00000399084 TMEM256Q8N2U0 113 aa13.88□□□□□ -0.19
HLA-DQB1-204ENST00000399084 VWC2LB2RUY7 222 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 BMPR1BO00238 502 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 OR2J3O76001 311 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 IGLV2-11P01706 119 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 CSN1S1P47710 185 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 DSCR9P59020 149 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 RAB4BP61018 213 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 PRR27Q6MZM9 219 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 C10orf105Q8TEF2 133 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 MS4A10Q96PG2 267 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 NEU1Q99519 415 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 CCL19Q99731 98 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 TMUB1Q9BVT8 246 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 RABAC1Q9UI14 185 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 HIGD1CA8MV81 97 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 FOXA3P55318 350 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 FBLN7Q53RD9 439 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 FAM162BQ5T6X4 162 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 MRPL54Q6P161 138 aaKnown RBP13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 CLEC2AQ6UVW9 174 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 UNQ5815/PRO19632Q6UWF5 114 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 MEGF9Q9H1U4 602 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 RPH3ALQ9UNE2 315 aa13.87□□□□□ -0.19
HLA-DQB1-204ENST00000399084 IGHV1-69DA0A0B4J2H0 117 aa13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 IGHV1-69P01742 117 aa13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 CRIP2P52943 208 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 PSG3Q16557 428 aa13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 FAM120AOSQ5T036 256 aa13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 CYB5R2Q6BCY4 276 aa13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 C16orf54Q6UWD8 224 aa13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 RBPMS2Q6ZRY4 209 aaKnown RBP13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 GOLT1AQ6ZVE7 132 aa13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 ZNF502Q8TBZ5 544 aa13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 NOL4LQ96MY1 436 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQB1-204ENST00000399084 TRBV7-1A0A0A6YYK4 115 aa13.85□□□□□ -0.19
HLA-DQB1-204ENST00000399084 A0A1B0GXF2 115 aa13.85□□□□□ -0.19
HLA-DQB1-204ENST00000399084 GRIFINA4D1Z8 144 aa13.85□□□□□ -0.19
HLA-DQB1-204ENST00000399084 DMRTA1Q5VZB9 504 aa13.85□□□□□ -0.19
HLA-DQB1-204ENST00000399084 EXOC3-AS1Q8N2X6 119 aa13.85□□□□□ -0.19
HLA-DQB1-204ENST00000399084 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
HLA-DQB1-204ENST00000399084 TP53TG3Q9ULZ0 132 aa13.85□□□□□ -0.19
HLA-DQB1-204ENST00000399084 DIRC3C9JPN6 131 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 SERF1AO75920 110 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 BRI3O95415 125 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 CA1P00915 261 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 SNRPCP09234 159 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 COL8A1P27658 744 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 HBBP68871 147 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 Q6AWC8 147 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 COX8CQ7Z4L0 72 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 GNB4Q9HAV0 340 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 MOB4Q9Y3A3 225 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 SMG1Q96Q15 3661 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 A0A1B0GW15 77 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 SPINK4O60575 86 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 KLF5Q13887 457 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 SAPCD1Q5SSQ6 148 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 C5orf56Q8N8D9 126 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 HSPB9Q9BQS6 159 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 PSG8Q9UQ74 426 aa13.84□□□□□ -0.19
HLA-DQB1-204ENST00000399084 HRNRQ86YZ3 2850 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB1-204ENST00000399084 A8MWP6 167 aa13.83□□□□□ -0.2
HLA-DQB1-204ENST00000399084 ATP6V0E1O15342 81 aa13.83□□□□□ -0.2
HLA-DQB1-204ENST00000399084 FRMD6-AS1P0C7T7 363 aa13.83□□□□□ -0.2
HLA-DQB1-204ENST00000399084 PAX1P15863 534 aa13.83□□□□□ -0.2
HLA-DQB1-204ENST00000399084 SLC35B1P78383 322 aa13.83□□□□□ -0.2
HLA-DQB1-204ENST00000399084 C1orf194Q5T5A4 169 aa13.83□□□□□ -0.2
HLA-DQB1-204ENST00000399084 PRNTQ86SH4 94 aa13.83□□□□□ -0.2
HLA-DQB1-204ENST00000399084 EEF1AKMT3Q96AZ1 226 aa13.83□□□□□ -0.2
HLA-DQB1-204ENST00000399084 OR2T8A6NH00 312 aa13.82□□□□□ -0.2
HLA-DQB1-204ENST00000399084 H3BTX0 84 aa13.82□□□□□ -0.2
HLA-DQB1-204ENST00000399084 NUPR1O60356 82 aa13.82□□□□□ -0.2
HLA-DQB1-204ENST00000399084 GATA3P23771 443 aa13.82□□□□□ -0.2
HLA-DQB1-204ENST00000399084 RHOGP84095 191 aa13.82□□□□□ -0.2
HLA-DQB1-204ENST00000399084 C15orf32Q32M92 178 aa13.82□□□□□ -0.2
HLA-DQB1-204ENST00000399084 SIGLECL1Q8N7X8 197 aa13.82□□□□□ -0.2
HLA-DQB1-204ENST00000399084 SAMD10Q9BYL1 202 aa13.82□□□□□ -0.2
HLA-DQB1-204ENST00000399084 ABCA1O95477 2261 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms