RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PLAUP00749 431 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 CD69Q07108 199 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 ZNF714Q96N38 554 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 MLST8Q9BVC4 326 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 ERG28Q9UKR5 140 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 HBDP02042 147 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 ATP5IP56385 69 aaPredicted RBP12.11□□□□□ -0.47
CYLD-202ENST00000398568 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 KLF12Q9Y4X4 402 aa12.11□□□□□ -0.47
CYLD-202ENST00000398568 GAGE5Q13069 117 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 GAGE6Q13070 117 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 SLC25A48Q6ZT89 311 aaKnown RBP12.1□□□□□ -0.47
CYLD-202ENST00000398568 ITLN1Q8WWA0 313 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 TPPP3Q9BW30 176 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 FREM1Q5H8C1 2179 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.1□□□□□ -0.47
CYLD-202ENST00000398568 hADV38S2A0JD32 116 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
CYLD-202ENST00000398568 FAM106CPP0CH98 169 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 FAM106AQ4KMX7 169 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 RFPL3SP0C7P2 107 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 PRCDQ00LT1 54 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 C2orf83Q53S99 150 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 CEND1Q8N111 149 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
CYLD-202ENST00000398568 NBASA2RRP1 2371 aa12.09□□□□□ -0.47
CYLD-202ENST00000398568 KLRD1Q13241 179 aa12.09□□□□□ -0.47
CYLD-202ENST00000398568 LTAP01374 205 aa12.09□□□□□ -0.47
CYLD-202ENST00000398568 GATA3P23771 443 aa12.09□□□□□ -0.47
CYLD-202ENST00000398568 FXYD7P58549 80 aa12.09□□□□□ -0.47
CYLD-202ENST00000398568 LOXL1Q08397 574 aaPredicted RBP12.09□□□□□ -0.47
CYLD-202ENST00000398568 TBC1D28Q2M2D7 210 aa12.09□□□□□ -0.47
CYLD-202ENST00000398568 PHLDA1Q8WV24 401 aaPredicted RBP12.09□□□□□ -0.47
CYLD-202ENST00000398568 SRSF12Q8WXF0 261 aaKnown RBP12.09□□□□□ -0.47
CYLD-202ENST00000398568 C15orf65H3BRN8 121 aa12.08□□□□□ -0.47
CYLD-202ENST00000398568 ARMS2P0C7Q2 107 aa12.08□□□□□ -0.47
CYLD-202ENST00000398568 METRNQ9UJH8 293 aa12.08□□□□□ -0.47
CYLD-202ENST00000398568 PTPRQQ9UMZ3 2332 aa12.08□□□□□ -0.48
CYLD-202ENST00000398568 C3AR1Q16581 482 aa12.08□□□□□ -0.48
CYLD-202ENST00000398568 ZNF766Q5HY98 468 aa12.08□□□□□ -0.48
CYLD-202ENST00000398568 ABHD17BQ5VST6 288 aa12.08□□□□□ -0.48
CYLD-202ENST00000398568 LINC00305Q7Z4B0 112 aa12.08□□□□□ -0.48
CYLD-202ENST00000398568 CACNG8Q8WXS5 425 aa12.08□□□□□ -0.48
CYLD-202ENST00000398568 MT-ATP8P03928 68 aa12.08□□□□□ -0.48
CYLD-202ENST00000398568 CR1LQ2VPA4 569 aa12.08□□□□□ -0.48
CYLD-202ENST00000398568 INO80CQ6PI98 192 aaPredicted RBP12.08□□□□□ -0.48
CYLD-202ENST00000398568 IGHV1-45A0A0A0MS14 117 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 A0A1B0GW15 77 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 FCER1GP30273 86 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 FOXI1Q12951 378 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 ATP1A1-AS1Q5TC04 95 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 FLYWCH2Q96CP2 140 aaKnown RBP12.07□□□□□ -0.48
CYLD-202ENST00000398568 DKK2Q9UBU2 259 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 PKD1L2Q7Z442 2459 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 IGKV3D-15A0A087WSY6 115 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 CYB561P49447 251 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 HOXA4Q00056 320 aaPredicted RBP12.07□□□□□ -0.48
CYLD-202ENST00000398568 SHISA2Q6UWI4 295 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 PRR7Q8TB68 274 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 PRELID3AQ96N28 172 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 A0A096LNJ9 63 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 ERHP84090 104 aaKnown RBP12.07□□□□□ -0.48
CYLD-202ENST00000398568 ALKBH6Q3KRA9 238 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 OR1L8Q8NGR8 309 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 TM2D2Q9BX73 214 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 LINC00312Q9Y6C7 94 aa12.07□□□□□ -0.48
CYLD-202ENST00000398568 SMG1Q96Q15 3661 aaKnown RBP12.07□□□□□ -0.48
CYLD-202ENST00000398568 WFDC3Q8IUB2 231 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 CIARTQ8N365 385 aaPredicted RBP12.06□□□□□ -0.48
CYLD-202ENST00000398568 TMEM178AQ8NBL3 297 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 B5MCH6 92 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 RNASE2P10153 161 aaKnown RBP12.06□□□□□ -0.48
CYLD-202ENST00000398568 ORM2P19652 201 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 PPIFP30405 207 aaKnown RBP12.06□□□□□ -0.48
CYLD-202ENST00000398568 CFHR2P36980 270 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 MYCNOSP40205 109 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 C12orf74Q32Q52 190 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 PRNTQ86SH4 94 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 MDP1Q86V88 176 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 TRBV25-1A0A075B6N4 114 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 D6R8Y8 96 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 TCRAP04437 139 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 IMMP1LQ96LU5 166 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 FAM173AQ9BQD7 235 aa12.06□□□□□ -0.48
CYLD-202ENST00000398568 K7EMI3 77 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 UPK2O00526 184 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 IL11RAQ14626 422 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 PATE2Q6UY27 113 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 Q6ZUT4 128 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 DDB2Q92466 427 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 NPIPB3Q92617 1050 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 C1QTNF4Q9BXJ3 329 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 HEATR1Q9H583 2144 aaKnown RBP12.05□□□□□ -0.48
CYLD-202ENST00000398568 PPP1R35Q8TAP8 253 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 PTPRBP23467 1997 aa12.05□□□□□ -0.48
CYLD-202ENST00000398568 NDUFS7O75251 213 aa12.04□□□□□ -0.48
CYLD-202ENST00000398568 ZNF134P52741 427 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms