RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TSKUQ8WUA8 353 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 FANCD2OSQ96PS1 177 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 IGLC2P0DOY2 106 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 RPL35P42766 123 aaKnown RBP4.65□□□□□ -1.67
PTPRD-206ENST00000397617 RPS10P46783 165 aaKnown RBP4.65□□□□□ -1.67
PTPRD-206ENST00000397617 TPPP2P59282 170 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 KIAA0141Q14154 515 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-206ENST00000397617 FXYD3Q14802 87 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 ADIRFQ15847 76 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 DGAT2L7PQ6IED9 249 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 ODF3Q96PU9 254 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 MUC4Q99102 2169 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 MSMBP08118 114 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 GALR1P47211 349 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 SSBP2P81877 361 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-206ENST00000397617 UBALD1Q8TB05 177 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 EPDR1Q9UM22 224 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 ELANEP08246 267 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 PDZD11Q5EBL8 140 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 ZNF491Q8N8L2 437 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H2BKO60814 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 TCRAP04437 139 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H2BJP06899 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H2BOP23527 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H2BBP33778 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H2BDP58876 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H2BCP62807 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 SUMO1P63165 101 aaKnown RBP4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST2H2BEQ16778 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-206ENST00000397617 LINC00518Q8N0U6 118 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H2BHQ93079 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 FXYD5Q96DB9 178 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H2BNQ99877 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H2BMQ99879 126 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 TRBV19A0A075B6N1 114 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 WI2-2373I1.2A0A1W2PRP0 233 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 AMTP48728 403 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 TNXAQ16473 311 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 FAM201AQ5SY85 155 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 REC114Q7Z4M0 266 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 GPHA2Q96T91 129 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 TRAV3A0A0B4J244 114 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 ZNF785A8K8V0 405 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 H3BRN7 92 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 BATF2Q8N1L9 274 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 PCNPQ8WW12 178 aaKnown RBP4.64□□□□□ -1.67
PTPRD-206ENST00000397617 ASCL2Q99929 193 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 NIT2Q9NQR4 276 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 NOTCH1P46531 2555 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 COL12A1Q99715 3063 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 NDUFB4O95168 129 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 MYOD1P15172 320 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 GNB1P62873 340 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 TMEM88Q6PEY1 159 aa4.64□□□□□ -1.67
PTPRD-206ENST00000397617 SPTBN5Q9NRC6 3674 aaKnown RBP4.64□□□□□ -1.67
PTPRD-206ENST00000397617 A0A0U1RQK1 487 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 C19orf54Q5BKX5 351 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 FAM24BQ8N5W8 94 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 ZNF705GA8MUZ8 300 aaPredicted RBP4.63□□□□□ -1.67
PTPRD-206ENST00000397617 GGTLC3B5MD39 225 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 MED14OSP0DP75 135 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 Q8N9W7 124 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 RAB37Q96AX2 223 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 PLAUP00749 431 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 RPLP1P05386 114 aaKnown RBP4.63□□□□□ -1.67
PTPRD-206ENST00000397617 TMEM11P17152 192 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 FA2HQ7L5A8 372 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 ZNF502Q8TBZ5 544 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 EEF1AKMT3Q96AZ1 226 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 IGHV7-81A0A0B4J1V7 117 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 ARF6P62330 175 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 HIST1H1AQ02539 215 aaPredicted RBP4.63□□□□□ -1.67
PTPRD-206ENST00000397617 OR5I1Q13606 314 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 GPR61Q9BZJ8 451 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 TMEM160Q9NX00 188 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 MRPS16Q9Y3D3 137 aaKnown RBP4.63□□□□□ -1.67
PTPRD-206ENST00000397617 OR2T8A6NH00 312 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 C9orf152Q5JTZ5 239 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 CYYR1Q96J86 154 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 A8MWP6 167 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 SLC17A3O00476 420 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 NDUFA4O00483 81 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 IGHV4-39P01824 125 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 PSG1P11464 419 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 NPPCP23582 126 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 SRSF3P84103 164 aaKnown RBP4.63□□□□□ -1.67
PTPRD-206ENST00000397617 SSMEM1Q8WWF3 244 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 TBX15Q96SF7 602 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 TP53TG3Q9ULZ0 132 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 GNG10P50151 68 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 TMEM208Q9BTX3 173 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 DMRT1Q9Y5R6 373 aa4.63□□□□□ -1.67
PTPRD-206ENST00000397617 ATP5J2P56134 94 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 ACTL10Q5JWF8 245 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 RBPMS2Q6ZRY4 209 aaKnown RBP4.62□□□□□ -1.67
PTPRD-206ENST00000397617 C7orf69Q9H7B7 122 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 GNB4Q9HAV0 340 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 PGPEP1LA6NFU8 196 aa4.62□□□□□ -1.67
PTPRD-206ENST00000397617 NTF3P20783 257 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms