RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 FAM240BA0A1B0GVZ2 78 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 LINC00869P0C866 280 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 RPL7P18124 248 aaKnown RBP9.95□□□□□ -0.82
CXCL12-205ENST00000395794 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 PAX9P55771 341 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 PSG9Q00887 426 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 FGL1Q08830 312 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 GDF5OSQ5U4N7 250 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 TMEM182Q6ZP80 229 aaPredicted RBP9.95□□□□□ -0.82
CXCL12-205ENST00000395794 LINC00299Q6ZSB3 139 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 ZNF431Q8TF32 576 aaPredicted RBP9.95□□□□□ -0.82
CXCL12-205ENST00000395794 S100ZQ8WXG8 99 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 CLUHP3Q96NS8 147 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 GGACTQ9BVM4 153 aa9.95□□□□□ -0.82
CXCL12-205ENST00000395794 IGHV3OR16-12A0A075B7B8 117 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 ELOA3CA0A087WX78 387 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-205ENST00000395794 SMIM9A6NGZ8 99 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 PMS2P5A8MQ11 134 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 IGLL5B9A064 214 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 CCSO14618 274 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 GOSR2O14653 212 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 MBPP02686 304 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-205ENST00000395794 H2AFB2P0C5Z0 115 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 PVALBP20472 110 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-205ENST00000395794 BCAP31P51572 246 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 FXYD7P58549 80 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 DEFB1P60022 68 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 FAM78BQ5VT40 261 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 LGALS9CQ6DKI2 356 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 C12orf45Q8N5I9 185 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-205ENST00000395794 SHANK2-AS3Q9BTD1 123 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 SCRT1Q9BWW7 348 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 SLC25A39Q9BZJ4 359 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-205ENST00000395794 ARL6Q9H0F7 186 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 RCL1Q9Y2P8 373 aaKnown RBP9.94□□□□□ -0.82
CXCL12-205ENST00000395794 GOLT1BQ9Y3E0 138 aa9.94□□□□□ -0.82
CXCL12-205ENST00000395794 LSM5Q9Y4Y9 91 aaKnown RBP9.94□□□□□ -0.82
CXCL12-205ENST00000395794 TRAV10A0A0B4J240 114 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 A0A0J9YX75 114 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 C7orf66A4D0T2 115 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 TMEM189A5PLL7 270 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 H3BRN7 92 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 DEDDO75618 318 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 CCNKO75909 580 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 LORP23490 312 aaPredicted RBP9.93□□□□□ -0.82
CXCL12-205ENST00000395794 CAV2P51636 162 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 PLP1P60201 277 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 RAB31Q13636 194 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 PXDC1Q5TGL8 231 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 ZNF546Q86UE3 836 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 LRRC20Q8TCA0 184 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 SEC22CQ9BRL7 303 aa9.93□□□□□ -0.82
CXCL12-205ENST00000395794 F6UB75 175 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 K7EPK0 472 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 DUSP14O95147 198 aaKnown RBP9.92□□□□□ -0.82
CXCL12-205ENST00000395794 SLC38A11Q08AI6 406 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 GSG1LQ6UXU4 331 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 ZNF705AQ6ZN79 300 aaPredicted RBP9.92□□□□□ -0.82
CXCL12-205ENST00000395794 Q6ZTC4 211 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 C20orf173Q96LM9 149 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 C2orf50Q96LR7 162 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 NEU1Q99519 415 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 RFNGQ9Y644 331 aa9.92□□□□□ -0.82
CXCL12-205ENST00000395794 SPART-AS1P0CW21 52 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 EMP1P54849 157 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 S100A10P60903 97 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 ZNF709Q8N972 641 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 ZNF738Q8NE65 137 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 UHRF2Q96PU4 802 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 TMEM208Q9BTX3 173 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 SLC35B3Q9H1N7 401 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 ARV1Q9H2C2 271 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 AGRNO00468 2067 aa9.91□□□□□ -0.82
CXCL12-205ENST00000395794 ZNF705FA8MVS1 300 aaPredicted RBP9.9□□□□□ -0.82
CXCL12-205ENST00000395794 AGPAT2O15120 278 aa9.9□□□□□ -0.82
CXCL12-205ENST00000395794 COX7A2P2O60397 106 aa9.9□□□□□ -0.82
CXCL12-205ENST00000395794 HBE1P02100 147 aa9.9□□□□□ -0.82
CXCL12-205ENST00000395794 AMBPP02760 352 aa9.9□□□□□ -0.82
CXCL12-205ENST00000395794 ZNF705DP0CH99 300 aaPredicted RBP9.9□□□□□ -0.82
CXCL12-205ENST00000395794 ZNF705BP0CI00 300 aaPredicted RBP9.9□□□□□ -0.82
CXCL12-205ENST00000395794 ENKURQ8TC29 256 aa9.9□□□□□ -0.82
CXCL12-205ENST00000395794 PPP1R14DQ9NXH3 145 aa9.9□□□□□ -0.82
CXCL12-205ENST00000395794 DEFB131BA0A096LNP1 70 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 TEX48A0A1B0GUV7 120 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 CST7O76096 145 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 CNN1P51911 297 aaKnown RBP9.89□□□□□ -0.83
CXCL12-205ENST00000395794 ARL16Q0P5N6 197 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 ASAH1Q13510 395 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 C12orf74Q32Q52 190 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 IGFL4Q6B9Z1 124 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 Q6ZRG5 221 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 LINC00305Q7Z4B0 112 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 STX12Q86Y82 276 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 GPN1Q9HCN4 374 aaPredicted RBP9.89□□□□□ -0.83
CXCL12-205ENST00000395794 CELA1Q9UNI1 258 aa9.89□□□□□ -0.83
CXCL12-205ENST00000395794 EPPK1P58107 5090 aaKnown RBP9.89□□□□□ -0.83
CXCL12-205ENST00000395794 IGHV4-4A0A075B6R2 117 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 A0A087X0K7 114 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms