RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SPOCK3Q9BQ16 436 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 CNOT1A5YKK6 2376 aaKnown RBP13.34□□□□□ -0.27
SCN3B-202ENST00000392770 NRN1Q9NPD7 142 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 PRR31Q5SQ13 230 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 Q96MF0 132 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 KAAG1Q9UBP8 84 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 ZNF256Q9Y2P7 627 aaPredicted RBP13.34□□□□□ -0.27
SCN3B-202ENST00000392770 EVI2AP22794 236 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 LCN12Q6JVE5 192 aa13.34□□□□□ -0.27
SCN3B-202ENST00000392770 H7C2G1 150 aa13.33□□□□□ -0.27
SCN3B-202ENST00000392770 SH2D1AO60880 128 aa13.33□□□□□ -0.27
SCN3B-202ENST00000392770 Q8TAT8 98 aa13.33□□□□□ -0.27
SCN3B-202ENST00000392770 LY96Q9Y6Y9 160 aa13.33□□□□□ -0.27
SCN3B-202ENST00000392770 F2Z2F3 143 aa13.33□□□□□ -0.28
SCN3B-202ENST00000392770 CTSZQ9UBR2 303 aa13.33□□□□□ -0.28
SCN3B-202ENST00000392770 LHBP01229 141 aa13.33□□□□□ -0.28
SCN3B-202ENST00000392770 SLC25A2Q9BXI2 301 aa13.33□□□□□ -0.28
SCN3B-202ENST00000392770 ST20Q9HBF5 79 aa13.33□□□□□ -0.28
SCN3B-202ENST00000392770 TRGV2A0A075B6R0 118 aa13.33□□□□□ -0.28
SCN3B-202ENST00000392770 SAP30O75446 220 aa13.33□□□□□ -0.28
SCN3B-202ENST00000392770 FAM90A2PQ658T7 463 aa13.33□□□□□ -0.28
SCN3B-202ENST00000392770 TMEM101Q96IK0 257 aa13.33□□□□□ -0.28
SCN3B-202ENST00000392770 IGHV2-70P01814 119 aa13.32□□□□□ -0.28
SCN3B-202ENST00000392770 TMEM170BQ5T4T1 132 aa13.32□□□□□ -0.28
SCN3B-202ENST00000392770 C9orf139Q6ZV77 190 aa13.32□□□□□ -0.28
SCN3B-202ENST00000392770 SEM1Q6ZVN7 128 aa13.32□□□□□ -0.28
SCN3B-202ENST00000392770 TRGV11A0A075B6L2 103 aa13.32□□□□□ -0.28
SCN3B-202ENST00000392770 NDUFB8O95169 186 aa13.32□□□□□ -0.28
SCN3B-202ENST00000392770 LYPD1Q8N2G4 141 aa13.32□□□□□ -0.28
SCN3B-202ENST00000392770 TCF21O43680 179 aa13.32□□□□□ -0.28
SCN3B-202ENST00000392770 PEF1Q9UBV8 284 aaKnown RBP13.32□□□□□ -0.28
SCN3B-202ENST00000392770 UBE2CO00762 179 aa13.31□□□□□ -0.28
SCN3B-202ENST00000392770 LINC00614P0C842 121 aa13.31□□□□□ -0.28
SCN3B-202ENST00000392770 ZNF138P52744 262 aa13.31□□□□□ -0.28
SCN3B-202ENST00000392770 TRAV8-1A0A0A6YYK1 113 aa13.31□□□□□ -0.28
SCN3B-202ENST00000392770 ST6GALNAC6Q969X2 333 aa13.31□□□□□ -0.28
SCN3B-202ENST00000392770 C14orf144Q96I85 54 aa13.31□□□□□ -0.28
SCN3B-202ENST00000392770 ZNF726P1Q15940 193 aa13.31□□□□□ -0.28
SCN3B-202ENST00000392770 FAM120AOSQ5T036 256 aa13.31□□□□□ -0.28
SCN3B-202ENST00000392770 NIT1Q86X76 327 aa13.31□□□□□ -0.28
SCN3B-202ENST00000392770 LYZL1Q6UWQ5 148 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 KLHL30-AS1Q8NEE0 82 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 MYO7BQ6PIF6 2116 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 TRAV8-6A0A0B4J262 113 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 SRRM4A7MD48 611 aaKnown RBP13.3□□□□□ -0.28
SCN3B-202ENST00000392770 C9JQL5 133 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 G3V318 75 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.3□□□□□ -0.28
SCN3B-202ENST00000392770 WISP2O76076 250 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 TDGF1P3P51864 188 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 ACTL10Q5JWF8 245 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 RHPN1-AS1Q9BWJ2 59 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 YLPM1P49750 1951 aaKnown RBP13.3□□□□□ -0.28
SCN3B-202ENST00000392770 NDUFA3O95167 84 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 HAPLN4Q86UW8 402 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 LYPD6Q86Y78 171 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 NUP35Q8NFH5 326 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 ZNF688P0C7X2 276 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 WT1-ASQ06250 92 aa13.3□□□□□ -0.28
SCN3B-202ENST00000392770 HOXB4P17483 251 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-202ENST00000392770 PCP4P48539 62 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 LCNL1Q6ZST4 164 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 GTSCR1Q86UQ5 136 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 FCN3O75636 299 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 CTAG1AP78358 180 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 Q86TA4 180 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 C2orf88Q9BSF0 95 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 BEX4Q9NWD9 120 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-202ENST00000392770 OR11H12B2RN74 326 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 ERCC8Q13216 396 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 OR11H1Q8NG94 326 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 OR11H2Q8NH07 326 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 ICE1Q9Y2F5 2266 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 SUMO2P61956 95 aaKnown RBP13.29□□□□□ -0.28
SCN3B-202ENST00000392770 SRSF1Q07955 248 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCN3B-202ENST00000392770 JOSD1Q15040 202 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-202ENST00000392770 CYYR1Q96J86 154 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 LINC00479Q96M42 142 aa13.29□□□□□ -0.28
SCN3B-202ENST00000392770 SNAI2O43623 268 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 NDUFS7O75251 213 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 MEIG1Q5JSS6 88 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 GSN-AS1Q9NRJ2 163 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 C22orf46C9J442 243 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 OVOL3O00110 214 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 GFI1BQ5VTD9 330 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 CHCHD1Q96BP2 118 aaKnown RBP13.28□□□□□ -0.28
SCN3B-202ENST00000392770 PPBPP02775 128 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 HBDP02042 147 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 YPEL3P61236 119 aaPredicted RBP13.28□□□□□ -0.28
SCN3B-202ENST00000392770 ADORA2A-AS1P86434 159 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 CIRBPQ14011 172 aaKnown RBP13.28□□□□□ -0.28
SCN3B-202ENST00000392770 DPH3Q96FX2 82 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
SCN3B-202ENST00000392770 KIAA2026Q5HYC2 2103 aa13.28□□□□□ -0.28
SCN3B-202ENST00000392770 IGHV2-5P01817 119 aa13.27□□□□□ -0.28
SCN3B-202ENST00000392770 PRSS2P07478 247 aa13.27□□□□□ -0.28
SCN3B-202ENST00000392770 FXYD7P58549 80 aa13.27□□□□□ -0.28
SCN3B-202ENST00000392770 CACNA1DQ01668 2161 aa13.27□□□□□ -0.28
SCN3B-202ENST00000392770 RASL11AQ6T310 242 aa13.27□□□□□ -0.28
SCN3B-202ENST00000392770 LINC00477Q96M19 166 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms