RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 LCE3CQ5T5A8 94 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 TMEM244Q5VVB8 128 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 MMGT1Q8N4V1 131 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 TEX29Q8N6K0 151 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 MORN4Q8NDC4 146 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 TSTD1Q8NFU3 115 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 OR4X2Q8NGF9 303 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 OR8B3Q8NGG8 313 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 OR5H6Q8NGV6 325 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 OR4K15Q8NH41 348 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 OR4C6Q8NH72 309 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 BRK1Q8WUW1 75 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 DIRC1Q969H9 104 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 TVP23CQ96ET8 276 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 ZC2HC1AQ96GY0 325 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 PRELID3AQ96N28 172 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 SMIM3Q9BZL3 60 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 C14orf132Q9NPU4 83 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 PRO2289Q9P1D8 64 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 ERG28Q9UKR5 140 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 CCL26Q9Y258 94 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 GREB1Q4ZG55 1949 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 ZNF407Q9C0G0 2248 aa0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 N4BP2Q86UW6 1770 aaPredicted RBP0.91□□□□□ -2.26
TRAJ39-201ENST00000390498 FER1L6Q2WGJ9 1857 aa0.9□□□□□ -2.26
TRAJ39-201ENST00000390498 MYO16Q9Y6X6 1858 aa0.9□□□□□ -2.26
TRAJ39-201ENST00000390498 MYH10P35580 1976 aa0.9□□□□□ -2.26
TRAJ39-201ENST00000390498 TP53BP1Q12888 1972 aaPredicted RBP0.9□□□□□ -2.26
TRAJ39-201ENST00000390498 FAM135BQ49AJ0 1406 aa0.9□□□□□ -2.26
TRAJ39-201ENST00000390498 SMG6Q86US8 1419 aaKnown RBP0.9□□□□□ -2.26
TRAJ39-201ENST00000390498 DLC1Q96QB1 1528 aa0.9□□□□□ -2.26
TRAJ39-201ENST00000390498 IGKV1D-42A0A075B6H8 117 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 MEIKINA0A087WXM9 373 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 A0A1B0GV90 55 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 A0A1W2PNN7 141 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 CCDC160A6NGH7 325 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 OR2T8A6NH00 312 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 MIF4GDA9UHW6 222 aaKnown RBP0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 LINC00587B1AMM8 73 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 FNDC10F2Z333 226 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 UQCRQO14949 82 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 DLEU1O43261 78 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 LYRM1O43325 122 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 OR1I1O60431 355 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 SMIM24O75264 130 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 PROSCO94903 275 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 IGLV3-19P01714 112 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 MT-ND4LP03901 98 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 MT-ND6P03923 174 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 GPX1P07203 203 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 MIFP14174 115 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 CSRP1P21291 193 aaKnown RBP0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 KDELR1P24390 212 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 MAXP61244 160 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 RRAS2P62070 204 aaPredicted RBP0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 RPS25P62851 125 aaKnown RBP0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 SELENOWP63302 87 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 SS18Q15532 418 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 TAF9Q16594 264 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 WHAMMP3Q1A5X7 153 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 HSD17B12Q53GQ0 312 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 Q6ZTI0 123 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 LINC00471Q8N535 108 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 FAM216BQ8N7L0 139 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 LINC00301Q8NCQ3 95 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 ZNF418Q8TF45 676 aaPredicted RBP0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 ARL11Q969Q4 196 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 CHCHD1Q96BP2 118 aaKnown RBP0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 C20orf166-AS1Q96NR2 134 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 RETNLBQ9BQ08 111 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 C2orf88Q9BSF0 95 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 CXCL16Q9H2A7 254 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 BANF2Q9H503 90 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 TAF9BQ9HBM6 251 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 LY96Q9Y6Y9 160 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 RIMS1Q86UR5 1692 aaKnown RBP0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 STRCQ7RTU9 1775 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 SCN9AQ15858 1988 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 PRR14LQ5THK1 2151 aa0.9□□□□□ -2.27
TRAJ39-201ENST00000390498 TNS3Q68CZ2 1445 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 FAM135AQ9P2D6 1515 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 CPAMD8Q8IZJ3 1885 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 EIF4G3O43432 1585 aaKnown RBP0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 KDM5CP41229 1560 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 ZNF518AQ6AHZ1 1483 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 FAM92AA1XBS5 289 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 ZNF727A8MUV8 499 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 IBA57-AS1B1ANH7 110 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 E7EQL1 145 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 K7ERU9 68 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 UBL3O95164 117 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 HBDP02042 147 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 TCRAP04437 139 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 SLC25A5P05141 298 aaKnown RBP0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 IGLC6P0CF74 106 aa0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 SAA1P0DJI8 122 aaPredicted RBP0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 MGST1P10620 155 aaKnown RBP0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 TPT1P13693 172 aaKnown RBP0.89□□□□□ -2.27
TRAJ39-201ENST00000390498 HLA-DRB4P13762 266 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms