RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SNAI2O43623 268 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 ZNF207O43670 478 aaKnown RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 GNG7O60262 68 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 TSPAN13O95857 204 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 PLAUP00749 431 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 IGKV1-16P04430 117 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 SLC25A5P05141 298 aaKnown RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 FTH1P19P0C7X4 201 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 PRDX2P32119 198 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 FOLR3P41439 243 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 GATA4P43694 442 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 CYB561P49447 251 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 SMCPP49901 116 aaPredicted RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 CCL11P51671 97 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 SRYQ05066 204 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 EDDM3AQ14507 147 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 ODF1Q14990 250 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 LTC4SQ16873 150 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 C10orf55Q5SWW7 151 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 PEAR1Q5VY43 1037 aaPredicted RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 MBNL2Q5VZF2 373 aaKnown RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 C10orf113Q5VZT2 155 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 INO80CQ6PI98 192 aaPredicted RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 ZNF562Q6V9R5 426 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 LCNL1Q6ZST4 164 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 CIARTQ8N365 385 aaPredicted RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 ZADH2Q8N4Q0 377 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 TMEM116Q8NCL8 245 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 NANOS1Q8WY41 292 aaKnown RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 TMEM190Q8WZ59 177 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 RND1Q92730 232 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 LEAP2Q969E1 77 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 PERPQ96FX8 193 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 FMC1Q96HJ9 113 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 SGK494Q96LW2 274 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 FER1L6-AS2Q96M78 137 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 GAFA1Q96PS6 74 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 ATP6V0BQ99437 205 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 TRGV9Q99603 122 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 SPAG8Q99932 426 aaPredicted RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 VGLL1Q99990 258 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 DUSP23Q9BVJ7 150 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 MRPL20Q9BYC9 149 aaKnown RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 GTSF1LQ9H1H1 148 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 CDIP1Q9H305 208 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 GCM1Q9NP62 436 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 OTORQ9NRC9 128 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 AP5S1Q9NUS5 200 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 TMEM14CQ9P0S9 112 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 GNG12Q9UBI6 72 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 RPUSD1Q9UJJ7 312 aaKnown RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 HHLA3Q9XRX5 114 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 TSSC4Q9Y5U2 329 aaPredicted RBP2.73□□□□□ -1.97
TRAV39-201ENST00000390466 SELENOKQ9Y6D0 94 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 POLEQ07864 2286 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 PKDREJQ9NTG1 2253 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 CACNA1AO00555 2505 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 MUC4Q99102 2169 aa2.73□□□□□ -1.97
TRAV39-201ENST00000390466 BAHCC1Q9P281 2608 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 EP300Q09472 2414 aaPredicted RBP2.72□□□□□ -1.97
TRAV39-201ENST00000390466 IGLV2-18A0A075B6J9 118 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 IGHV3OR15-7A0A075B7D8 119 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.72□□□□□ -1.97
TRAV39-201ENST00000390466 TRAV8-1A0A0A6YYK1 113 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.72□□□□□ -1.97
TRAV39-201ENST00000390466 A0A1B0GUT8 65 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 A0A1B0GW15 77 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 A0A1W2PNU3 283 aaPredicted RBP2.72□□□□□ -1.97
TRAV39-201ENST00000390466 A0A1W2PRD5 423 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 A0A1W2PRF3 423 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 A0A1W2PRM7 423 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 GAGE12HA6NDE8 117 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 A6NJY4 79 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 K7ERJ3 54 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 COX7A2P2O60397 106 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 NDUFS7O75251 213 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 CER1O95813 267 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 NPYP01303 97 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 P01737 135 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 IGHV3-13P01766 116 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 HBDP02042 147 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 CRYGBP07316 175 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 ROS1P08922 2347 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 CECR9P0C854 216 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 IGLC6P0CF74 106 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 IFI27P40305 119 aaPredicted RBP2.72□□□□□ -1.97
TRAV39-201ENST00000390466 KIR2DL2P43627 348 aaPredicted RBP2.72□□□□□ -1.97
TRAV39-201ENST00000390466 CSN1S1P47710 185 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 INSL3P51460 131 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 DLX6P56179 175 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 CACNG7P62955 275 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 SRSF1Q07955 248 aaKnown RBP eCLIP2.72□□□□□ -1.97
TRAV39-201ENST00000390466 SMAGPQ0VAQ4 97 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 WFDC2Q14508 124 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 C5orf64Q2M2E5 130 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 TMEM30BQ3MIR4 351 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 OTOGLQ3ZCN5 2332 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 CD300EQ496F6 205 aaPredicted RBP2.72□□□□□ -1.97
TRAV39-201ENST00000390466 TIMM23BQ5SRD1 257 aa2.72□□□□□ -1.97
TRAV39-201ENST00000390466 FAM104BQ5XKR9 115 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms