RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 H3BPC8 53 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 DEGS1O15121 323 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 STX7O15400 261 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 RAD51CO43502 376 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 EIF1BO60739 113 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 SOD1P00441 154 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 IFNB1P01574 187 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 S100BP04271 92 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 IFI6P09912 130 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 COX7CP15954 63 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 RPL7P18124 248 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 RAB3AP20336 220 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 COX7BP24311 80 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 PSMA3P25788 255 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 IFNA8P32881 189 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 EIF1P41567 113 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 RABIFP47224 123 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 ATP5J2P56134 94 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 UBE2G2P60604 165 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 SNRPD2P62316 118 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 EMX2Q04743 252 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 MSMO1Q15800 293 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 NDUFA5Q16718 116 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 GOLGA7BQ2TAP0 167 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 MRPL51Q4U2R6 128 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 BCL7AQ4VC05 210 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 BVES-AS1Q5T3Y7 98 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 NIPAL3Q6P499 406 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 PLET1Q6UQ28 207 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 NDUFAF7Q7L592 441 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 ITPRIPQ8IWB1 547 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 C1orf174Q8IYL3 243 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 EIF1ADQ8N9N8 165 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 TTC29Q8NA56 475 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 CCDC112Q8NEF3 446 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 DEFB124Q8NES8 71 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR4K14Q8NGD5 310 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR5B3Q8NH48 314 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR10A6Q8NH74 314 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 TRMT10AQ8TBZ6 339 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 ENKURQ8TC29 256 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 ASZ1Q8WWH4 475 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 FGF11Q92914 225 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 TP53RKQ96S44 253 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 BPIFA3Q9BQP9 254 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 C7orf50Q9BRJ6 194 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 SPXQ9BT56 116 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 CHCHD7Q9BUK0 85 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 SNRNP25Q9BV90 132 aaKnown RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM109Q9BVC6 243 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 GABARAPL1Q9H0R8 117 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR2D2Q9H210 308 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 PIGUQ9H490 435 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 REEP4Q9H6H4 257 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 RRAGDQ9NQL2 400 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 HAUS2Q9NVX0 235 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 ARGLU1Q9NWB6 273 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 BET1LQ9NYM9 111 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 STAP1Q9ULZ2 295 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 CAB39Q9Y376 341 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 SNX5Q9Y5X3 404 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 CFAP43Q8NDM7 1665 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 PREX1Q8TCU6 1659 aa-2.12□□□□□ -2.75
RNU6-540P-201ENST00000384622 DEPDC5O75140 1603 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 PLEKHH2Q8IVE3 1493 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 NRKQ7Z2Y5 1582 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 BLMP54132 1417 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 TRAV12-2A0A075B6T6 113 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 TRGV10A0A0A0MS01 117 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMED7-TICAM2A0A0A6YYA0 188 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 SPTY2D1-AS1A0A0U1RR47 76 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 KBTBD11-OT1A0A1B0GTJ5 212 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 A0A1B0GX51 115 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM189A5PLL7 270 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR6C6A6NF89 314 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR2AG2A6NM03 316 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 A8MT66 165 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 ZNF670-ZNF695F2Z2N8 137 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 M0R381 172 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 LIN7AO14910 233 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 EEF1E1O43324 174 aaKnown RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 CHMP2AO43633 222 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 PPP1R17O96001 155 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 APOA1P02647 267 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 ISG15P05161 165 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 SERPINA6P08185 405 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR8U9P0C7N5 309 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 BAALC-AS2P0C853 105 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 ORM2P19652 201 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 HIST1H1TP22492 207 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 ATP6V0CP27449 155 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR1E1P30953 314 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 GNRHRP30968 328 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 SSR2P43308 183 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 RAB13P51153 203 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 MRPS36P82909 103 aaKnown RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 RAD51Q06609 339 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 RPA4Q13156 261 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 RCN1Q15293 331 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 CYTH1Q15438 398 aa-2.13□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms