RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 SCN10AQ9Y5Y9 1956 aa13.94□□□□□ -0.18
COL4A3BP-203ENST00000380494 IGHV1-3A0A0C4DH29 117 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 PAX9P55771 341 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 LSM4Q9Y4Z0 139 aaKnown RBP13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 SIP14410 1827 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 IGHV1-8P0DP01 117 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 FAM104BQ5XKR9 115 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 SHANK2-AS3Q9BTD1 123 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 SELENOKQ9Y6D0 94 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 KIR2DL5BA0A0G2JN68 375 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 KIR2DL5BA0A0G2JPC4 375 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 LHFPL4Q7Z7J7 247 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 STHQ8IWL8 128 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 KIR2DL5AQ8N109 375 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 PRR31Q5SQ13 230 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 TMEM200BQ69YZ2 307 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 MCRIP2Q9BUT9 160 aaKnown RBP13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 ARMS2P0C7Q2 107 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 SP9P0CG40 484 aa13.93□□□□□ -0.18
COL4A3BP-203ENST00000380494 IGHV3-11P01762 117 aa13.92□□□□□ -0.18
COL4A3BP-203ENST00000380494 GAGE2AQ6NT46 116 aa13.92□□□□□ -0.18
COL4A3BP-203ENST00000380494 C5orf63A6NC05 138 aa13.92□□□□□ -0.18
COL4A3BP-203ENST00000380494 RPL15P61313 204 aaKnown RBP13.92□□□□□ -0.18
COL4A3BP-203ENST00000380494 NPC2P61916 151 aa13.92□□□□□ -0.18
COL4A3BP-203ENST00000380494 ZNF876PQ49A33 203 aa13.92□□□□□ -0.18
COL4A3BP-203ENST00000380494 CEND1Q8N111 149 aa13.92□□□□□ -0.18
COL4A3BP-203ENST00000380494 SMKR1H3BMG3 65 aa13.92□□□□□ -0.18
COL4A3BP-203ENST00000380494 ZNF688P0C7X2 276 aa13.91□□□□□ -0.18
COL4A3BP-203ENST00000380494 UTF1Q5T230 341 aa13.91□□□□□ -0.18
COL4A3BP-203ENST00000380494 ZCCHC24Q8N2G6 241 aaKnown RBP13.91□□□□□ -0.18
COL4A3BP-203ENST00000380494 EPOPA6NHQ4 379 aa13.91□□□□□ -0.18
COL4A3BP-203ENST00000380494 CFHR1Q03591 330 aa13.91□□□□□ -0.18
COL4A3BP-203ENST00000380494 VWC2LB2RUY7 222 aa13.91□□□□□ -0.18
COL4A3BP-203ENST00000380494 SPRR3Q9UBC9 169 aa13.91□□□□□ -0.18
COL4A3BP-203ENST00000380494 C1orf122Q6ZSJ8 110 aa13.91□□□□□ -0.18
COL4A3BP-203ENST00000380494 LY6G5BQ8NDX9 201 aa13.91□□□□□ -0.18
COL4A3BP-203ENST00000380494 DTX1Q86Y01 620 aa13.9□□□□□ -0.18
COL4A3BP-203ENST00000380494 PINLYPA6NC86 204 aa13.9□□□□□ -0.18
COL4A3BP-203ENST00000380494 PRR19A6NJB7 356 aa13.9□□□□□ -0.18
COL4A3BP-203ENST00000380494 IGLC7A0M8Q6 106 aa13.9□□□□□ -0.18
COL4A3BP-203ENST00000380494 ZNF581Q9P0T4 197 aa13.9□□□□□ -0.18
COL4A3BP-203ENST00000380494 MINOS1Q5TGZ0 78 aa13.9□□□□□ -0.18
COL4A3BP-203ENST00000380494 C11orf52Q96A22 123 aa13.9□□□□□ -0.18
COL4A3BP-203ENST00000380494 MINOS1-NBL1R4GNA1 71 aa13.9□□□□□ -0.18
COL4A3BP-203ENST00000380494 TRAV41A0A0B4J266 112 aa13.89□□□□□ -0.19
COL4A3BP-203ENST00000380494 C15orf32Q32M92 178 aa13.89□□□□□ -0.19
COL4A3BP-203ENST00000380494 AZU1P20160 251 aa13.89□□□□□ -0.19
COL4A3BP-203ENST00000380494 PF4P02776 101 aa13.89□□□□□ -0.19
COL4A3BP-203ENST00000380494 COA6Q5JTJ3 125 aaKnown RBP13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 ZNF474Q6S9Z5 364 aaPredicted RBP13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 C20orf204Q6ZNR8 217 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 Q8TAT8 98 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 CYYR1Q96J86 154 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 GAFA1Q96PS6 74 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 TMEM14BQ9NUH8 114 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 F5P12259 2224 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 A0A0U1RRA0 63 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 RCHY1Q96PM5 261 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 PAX4O43316 350 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 KLF5Q13887 457 aaPredicted RBP13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 ZNF415Q09FC8 603 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 C14orf178Q8N769 122 aaPredicted RBP13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 METRNQ9UJH8 293 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 SIGLEC9Q9Y336 463 aa13.88□□□□□ -0.19
COL4A3BP-203ENST00000380494 LINC00479Q96M42 142 aa13.87□□□□□ -0.19
COL4A3BP-203ENST00000380494 LAMTOR3Q9UHA4 124 aa13.87□□□□□ -0.19
COL4A3BP-203ENST00000380494 TRGV4A0A0C4DH28 118 aa13.87□□□□□ -0.19
COL4A3BP-203ENST00000380494 IGKV1-6A0A0C4DH72 117 aa13.87□□□□□ -0.19
COL4A3BP-203ENST00000380494 WIPF2Q8TF74 440 aaPredicted RBP13.87□□□□□ -0.19
COL4A3BP-203ENST00000380494 CMC4P56277 68 aaPredicted RBP13.87□□□□□ -0.19
COL4A3BP-203ENST00000380494 C5orf24Q7Z6I8 188 aa13.87□□□□□ -0.19
COL4A3BP-203ENST00000380494 ETDBQ3ZM63 59 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 TRPT1Q86TN4 253 aaKnown RBP13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 DTX2Q86UW9 622 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 FAM168AQ92567 244 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 JPT2Q9H910 190 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 WNT2P09544 360 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 CFHR2P36980 270 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 PRADC1Q9BSG0 188 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 RPL36AP83881 106 aaKnown RBP13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 RNASE6Q93091 150 aaKnown RBP13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 RPL36ALQ969Q0 106 aaKnown RBP13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 C1orf147Q96MC9 270 aaPredicted RBP13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 C1QTNF4Q9BXJ3 329 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 TMEM178BH3BS89 294 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 THBDP07204 575 aa13.86□□□□□ -0.19
COL4A3BP-203ENST00000380494 IL18BPO95998 194 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 TCF15Q12870 199 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 PRSS22Q9GZN4 317 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 FAM223BA6NKX1 122 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 SOCS3O14543 225 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 ZFP36L1Q07352 338 aaKnown RBP13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 FAM223AQ8IWN6 122 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 CHCHD5Q9BSY4 110 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 ASCC3Q8N3C0 2202 aaKnown RBP13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 TMEM213A2RRL7 107 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 ERCC8Q13216 396 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 PMVKQ15126 192 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 GREB1Q4ZG55 1949 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms