RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 EXOC3-AS1Q8N2X6 119 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 EEF1AKMT3Q96AZ1 226 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 C17orf77Q96MU5 243 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 PITPNC1Q9UKF7 332 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 V9GYV3 84 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 UBE2CO00762 179 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 IGLC2P0DOY2 106 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 CLEC19AQ6UXS0 136 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 GNB4Q9HAV0 340 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 OSTCQ9NRP0 149 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 RABAC1Q9UI14 185 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 J3QLI3 93 aa11.71□□□□□ -0.53
SNX2-201ENST00000379516 PHOX2AO14813 284 aa11.71□□□□□ -0.53
SNX2-201ENST00000379516 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.53
SNX2-201ENST00000379516 TCRAP04437 139 aa11.71□□□□□ -0.53
SNX2-201ENST00000379516 TYMSP04818 313 aa11.71□□□□□ -0.53
SNX2-201ENST00000379516 CRIP2P52943 208 aaPredicted RBP11.71□□□□□ -0.53
SNX2-201ENST00000379516 Q5PR19 223 aa11.71□□□□□ -0.53
SNX2-201ENST00000379516 IBA57Q5T440 356 aaKnown RBP11.71□□□□□ -0.53
SNX2-201ENST00000379516 LRRC75A-AS1Q8N1F1 130 aa11.71□□□□□ -0.53
SNX2-201ENST00000379516 CMTM2Q8TAZ6 248 aa11.71□□□□□ -0.53
SNX2-201ENST00000379516 BTF3L4Q96K17 158 aa11.71□□□□□ -0.53
SNX2-201ENST00000379516 IGHV3OR16-8A0A075B7F1 116 aa11.71□□□□□ -0.54
SNX2-201ENST00000379516 M0QZK8 103 aa11.71□□□□□ -0.54
SNX2-201ENST00000379516 ATP5G2Q06055 141 aa11.71□□□□□ -0.54
SNX2-201ENST00000379516 RPEL1Q2QD12 228 aa11.71□□□□□ -0.54
SNX2-201ENST00000379516 C19orf54Q5BKX5 351 aa11.71□□□□□ -0.54
SNX2-201ENST00000379516 CCDC140Q96MF4 163 aa11.71□□□□□ -0.54
SNX2-201ENST00000379516 GAR1Q9NY12 217 aaKnown RBP11.71□□□□□ -0.54
SNX2-201ENST00000379516 KLF12Q9Y4X4 402 aa11.71□□□□□ -0.54
SNX2-201ENST00000379516 USP9YO00507 2555 aaPredicted RBP11.7□□□□□ -0.54
SNX2-201ENST00000379516 TRBV7-1A0A0A6YYK4 115 aa11.7□□□□□ -0.54
SNX2-201ENST00000379516 BMPR1BO00238 502 aa11.7□□□□□ -0.54
SNX2-201ENST00000379516 BLCAPP62952 87 aa11.7□□□□□ -0.54
SNX2-201ENST00000379516 ZNF414Q96IQ9 312 aa11.7□□□□□ -0.54
SNX2-201ENST00000379516 SERTAD4Q9NUC0 356 aa11.7□□□□□ -0.54
SNX2-201ENST00000379516 IGHG2P01859 326 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 IGF1P05019 195 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 S100A9P06702 114 aaKnown RBP11.69□□□□□ -0.54
SNX2-201ENST00000379516 IGHV4-31P0DP07 118 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 DEFB112Q30KQ8 113 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 TOMM20LQ6UXN7 152 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 FMC1Q96HJ9 113 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 NOL4LQ96MY1 436 aaPredicted RBP11.69□□□□□ -0.54
SNX2-201ENST00000379516 PTPN13Q12923 2485 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 TRGV3P03979 118 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 PRR27Q6MZM9 219 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 SIGLEC15Q6ZMC9 328 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 GPR82Q96P67 336 aa11.69□□□□□ -0.54
SNX2-201ENST00000379516 ZNF705GA8MUZ8 300 aaPredicted RBP11.68□□□□□ -0.54
SNX2-201ENST00000379516 LYPD1Q8N2G4 141 aa11.68□□□□□ -0.54
SNX2-201ENST00000379516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.68□□□□□ -0.544e-10■■■■■ 30.8
SNX2-201ENST00000379516 FAM223BA6NKX1 122 aa11.68□□□□□ -0.54
SNX2-201ENST00000379516 RPL7P18124 248 aaKnown RBP11.68□□□□□ -0.54
SNX2-201ENST00000379516 RPL15P61313 204 aaKnown RBP11.68□□□□□ -0.54
SNX2-201ENST00000379516 ACTL10Q5JWF8 245 aa11.68□□□□□ -0.54
SNX2-201ENST00000379516 Q6ZS46 218 aa11.68□□□□□ -0.54
SNX2-201ENST00000379516 GOLT1AQ6ZVE7 132 aa11.68□□□□□ -0.54
SNX2-201ENST00000379516 FAM223AQ8IWN6 122 aa11.68□□□□□ -0.54
SNX2-201ENST00000379516 OR8I2Q8N0Y5 310 aa11.68□□□□□ -0.54
SNX2-201ENST00000379516 Q96MF0 132 aa11.68□□□□□ -0.54
SNX2-201ENST00000379516 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
SNX2-201ENST00000379516 TRAV9-1A0A075B6T8 112 aa11.67□□□□□ -0.54
SNX2-201ENST00000379516 S100A7P31151 101 aa11.67□□□□□ -0.54
SNX2-201ENST00000379516 TPPP2P59282 170 aa11.67□□□□□ -0.54
SNX2-201ENST00000379516 TRAPPC1Q9Y5R8 145 aa11.67□□□□□ -0.54
SNX2-201ENST00000379516 TRAV8-1A0A0A6YYK1 113 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 LTAP01374 205 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 IGHV4-59P01825 116 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 PLA2G2AP14555 144 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 HOXA5P20719 270 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 PDE6HQ13956 83 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 SMIM12Q96EX1 92 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 ABCA12Q86UK0 2595 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 CHD6Q8TD26 2715 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 GATCO43716 136 aaKnown RBP11.66□□□□□ -0.54
SNX2-201ENST00000379516 CA1P00915 261 aaPredicted RBP11.66□□□□□ -0.54
SNX2-201ENST00000379516 PPIFP30405 207 aaKnown RBP11.66□□□□□ -0.54
SNX2-201ENST00000379516 TCL1AP56279 114 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 FAM231DQ6ZW35 169 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 NUDT10Q8NFP7 164 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 NUDT11Q96G61 164 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 MLST8Q9BVC4 326 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 AAMDCQ9H7C9 122 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 NAV2Q8IVL1 2488 aa11.66□□□□□ -0.54
SNX2-201ENST00000379516 J3QKU1 62 aa11.65□□□□□ -0.54
SNX2-201ENST00000379516 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.54
SNX2-201ENST00000379516 RELQ04864 619 aaPredicted RBP11.65□□□□□ -0.54
SNX2-201ENST00000379516 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
SNX2-201ENST00000379516 LINC00518Q8N0U6 118 aa11.65□□□□□ -0.54
SNX2-201ENST00000379516 TMEM190Q8WZ59 177 aa11.65□□□□□ -0.54
SNX2-201ENST00000379516 NBPF19A0A087WUL8 3843 aa11.65□□□□□ -0.55
SNX2-201ENST00000379516 M0R3E3 92 aa11.65□□□□□ -0.55
SNX2-201ENST00000379516 PRNTQ86SH4 94 aa11.65□□□□□ -0.55
SNX2-201ENST00000379516 SMAD5-AS1Q9Y6J3 95 aa11.65□□□□□ -0.55
SNX2-201ENST00000379516 SMIM27A0A1W2PRY6 76 aa11.64□□□□□ -0.55
SNX2-201ENST00000379516 SPINK4O60575 86 aa11.64□□□□□ -0.55
SNX2-201ENST00000379516 IGLV2-11P01706 119 aa11.64□□□□□ -0.55
SNX2-201ENST00000379516 CDX1P47902 265 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms