RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 TMEM158Q8WZ71 300 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 MGST2Q99735 147 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 TRBV6-7A0A0A0MS04 114 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 TMEM238C9JI98 176 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 IGKV1-39P01597 117 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 IGKV1D-39P04432 117 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 HGFACQ04756 655 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 Q6ZQT7 251 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 SHISA3A0PJX4 238 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 CD5LO43866 347 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 CCL20P78556 96 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 DTX1Q86Y01 620 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 ANK1P16157 1881 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 RPL18AQ02543 176 aaKnown RBP13.33□□□□□ -0.27
RGP1-201ENST00000378078 LAMTOR2Q9Y2Q5 125 aa13.33□□□□□ -0.27
RGP1-201ENST00000378078 LINC01619G3V211 115 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 TAL2Q16559 108 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 RSPO3Q9BXY4 272 aaPredicted RBP13.33□□□□□ -0.28
RGP1-201ENST00000378078 COL18A1P39060 1754 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 IGKV2D-24A0A075B6R9 120 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 NEGR1Q7Z3B1 354 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 IGKV1D-8A0A087WSZ0 117 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 LINC00518Q8N0U6 118 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 TMEM256Q8N2U0 113 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 TIMM21Q9BVV7 248 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 AHCTF1Q8WYP5 2266 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.33□□□□□ -0.28
RGP1-201ENST00000378078 ZNF883P0CG24 379 aa13.33□□□□□ -0.28
RGP1-201ENST00000378078 IGLV3-21P80748 117 aaPredicted RBP13.33□□□□□ -0.28
RGP1-201ENST00000378078 ARID2Q68CP9 1835 aa13.32□□□□□ -0.28
RGP1-201ENST00000378078 BRCA1P38398 1863 aaKnown RBP13.32□□□□□ -0.28
RGP1-201ENST00000378078 COL4A1P02462 1669 aa13.32□□□□□ -0.28
RGP1-201ENST00000378078 MRPL14Q6P1L8 145 aaKnown RBP13.32□□□□□ -0.28
RGP1-201ENST00000378078 A0A1W2PRE2 83 aa13.32□□□□□ -0.28
RGP1-201ENST00000378078 FAM90A2PQ658T7 463 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 CMC4P56277 68 aaPredicted RBP13.31□□□□□ -0.28
RGP1-201ENST00000378078 NABP1Q96AH0 204 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 ATRAIDQ6UW56 229 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 GUSBP1Q15486 140 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 C20orf204Q6ZNR8 217 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 SIGMAR1Q99720 223 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 IGHV4-28A0A0C4DH34 117 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 E9PQ18 207 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 ATP5IP56385 69 aaPredicted RBP13.31□□□□□ -0.28
RGP1-201ENST00000378078 TCF15Q12870 199 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 VWCEQ96DN2 955 aa13.31□□□□□ -0.28
RGP1-201ENST00000378078 UBE2E1P51965 193 aa13.3□□□□□ -0.28
RGP1-201ENST00000378078 BCL6BQ8N143 479 aaPredicted RBP13.3□□□□□ -0.28
RGP1-201ENST00000378078 EIF4EBP2Q13542 120 aaPredicted RBP13.3□□□□□ -0.28
RGP1-201ENST00000378078 ZNF581Q9P0T4 197 aa13.3□□□□□ -0.28
RGP1-201ENST00000378078 GAFA1Q96PS6 74 aa13.3□□□□□ -0.28
RGP1-201ENST00000378078 AMN1Q8IY45 258 aa13.3□□□□□ -0.28
RGP1-201ENST00000378078 IGKV1-9A0A0C4DH69 117 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 ANGP03950 147 aaKnown RBP13.29□□□□□ -0.28
RGP1-201ENST00000378078 SCRT2Q9NQ03 307 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 H0YJW9 148 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 ZFAND6Q6FIF0 208 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 APC2O95996 2303 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 SPOCK3Q9BQ16 436 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 A0A1B0GTI1 187 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 PRSS29PA6NIE9 313 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 G3V318 75 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 SLC25A16P16260 332 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 CFHR2P36980 270 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 PSG3Q16557 428 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 C1QTNF4Q9BXJ3 329 aa13.29□□□□□ -0.28
RGP1-201ENST00000378078 TIMM17AQ99595 171 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 E7EQL1 145 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 J3QW42 95 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 VCYO14598 125 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 VWC2Q2TAL6 325 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 TSKUQ8WUA8 353 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 ESM1Q9NQ30 184 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 ATP6V0E1O15342 81 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 KLF5Q13887 457 aaPredicted RBP13.28□□□□□ -0.28
RGP1-201ENST00000378078 MYO7BQ6PIF6 2116 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 RNF126Q9BV68 326 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 TNS1Q9HBL0 1735 aaKnown RBP13.28□□□□□ -0.28
RGP1-201ENST00000378078 CSRP1P21291 193 aaKnown RBP13.28□□□□□ -0.28
RGP1-201ENST00000378078 C5orf63A6NC05 138 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 C9JAW5 83 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 C5orf64Q2M2E5 130 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 ZNRF2Q8NHG8 242 aa13.28□□□□□ -0.28
RGP1-201ENST00000378078 SIPA1L3O60292 1781 aaPredicted RBP13.28□□□□□ -0.28
RGP1-201ENST00000378078 MST1P26927 711 aa13.27□□□□□ -0.28
RGP1-201ENST00000378078 TREML4Q6UXN2 200 aa13.27□□□□□ -0.28
RGP1-201ENST00000378078 SLC25A48Q6ZT89 311 aaKnown RBP13.27□□□□□ -0.28
RGP1-201ENST00000378078 TMEM242Q9NWH2 141 aa13.27□□□□□ -0.28
RGP1-201ENST00000378078 TRBV25-1A0A075B6N4 114 aa13.27□□□□□ -0.28
RGP1-201ENST00000378078 MSMBP08118 114 aa13.27□□□□□ -0.28
RGP1-201ENST00000378078 PRSS57Q6UWY2 283 aa13.27□□□□□ -0.29
RGP1-201ENST00000378078 NUP35Q8NFH5 326 aa13.27□□□□□ -0.29
RGP1-201ENST00000378078 SBF2Q86WG5 1849 aa13.27□□□□□ -0.29
RGP1-201ENST00000378078 HAMPP81172 84 aa13.27□□□□□ -0.29
RGP1-201ENST00000378078 DOCK7Q96N67 2140 aa13.27□□□□□ -0.29
RGP1-201ENST00000378078 TRAV9-2A0A087WT02 112 aa13.27□□□□□ -0.29
RGP1-201ENST00000378078 TINCRA0A1B0GVN0 87 aa13.27□□□□□ -0.29
RGP1-201ENST00000378078 LINC00479Q96M42 142 aa13.27□□□□□ -0.29
RGP1-201ENST00000378078 GTSF1LQ9H1H1 148 aa13.27□□□□□ -0.29
RGP1-201ENST00000378078 FAM223BA6NKX1 122 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms