RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ZNF331Q9NQX6 463 aaPredicted RBP15.87■□□□□ 0.13
VSX1-202ENST00000376709 TRBV19A0A075B6N1 114 aa15.87■□□□□ 0.13
VSX1-202ENST00000376709 NPFFO15130 113 aa15.87■□□□□ 0.13
VSX1-202ENST00000376709 EGR2P11161 476 aaPredicted RBP15.87■□□□□ 0.13
VSX1-202ENST00000376709 LINC00310P59036 64 aa15.87■□□□□ 0.13
VSX1-202ENST00000376709 TMUB1Q9BVT8 246 aa15.87■□□□□ 0.13
VSX1-202ENST00000376709 F8W735 103 aaPredicted RBP15.86■□□□□ 0.13
VSX1-202ENST00000376709 HLA-DQA1P01909 254 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 IGLC2P0DOY2 106 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 PKIAP61925 76 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 HSPB9Q9BQS6 159 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 ZNF462Q96JM2 2506 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 TRAV8-1A0A0A6YYK1 113 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 OR2T8A6NH00 312 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 F2Z2F3 143 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 SCGB2A1O75556 95 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 GOLT1AQ6ZVE7 132 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 BAGE3Q86Y29 109 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 PIP4P2Q8N4L2 257 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 TSKUQ8WUA8 353 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 C17orf77Q96MU5 243 aa15.86■□□□□ 0.13
VSX1-202ENST00000376709 TSTD3H0UI37 97 aa15.85■□□□□ 0.13
VSX1-202ENST00000376709 ECSCRQ19T08 205 aa15.85■□□□□ 0.13
VSX1-202ENST00000376709 NUP35Q8NFH5 326 aa15.85■□□□□ 0.13
VSX1-202ENST00000376709 PIMREGQ9BSJ6 248 aa15.85■□□□□ 0.13
VSX1-202ENST00000376709 FBXL7Q9UJT9 491 aa15.85■□□□□ 0.13
VSX1-202ENST00000376709 HIGD1CA8MV81 97 aa15.85■□□□□ 0.13
VSX1-202ENST00000376709 SERF1AO75920 110 aa15.85■□□□□ 0.13
VSX1-202ENST00000376709 Q86TA4 180 aa15.85■□□□□ 0.13
VSX1-202ENST00000376709 NEU1Q99519 415 aa15.85■□□□□ 0.13
VSX1-202ENST00000376709 CELSR2Q9HCU4 2923 aa15.84■□□□□ 0.13
VSX1-202ENST00000376709 MAP1AP78559 2803 aaPredicted RBP15.84■□□□□ 0.13
VSX1-202ENST00000376709 CENPVL3A0A0U1RRI6 287 aa15.84■□□□□ 0.13
VSX1-202ENST00000376709 KIAA1644Q3SXP7 199 aa15.84■□□□□ 0.13
VSX1-202ENST00000376709 UNQ5815/PRO19632Q6UWF5 114 aa15.84■□□□□ 0.13
VSX1-202ENST00000376709 BCL6BQ8N143 479 aaPredicted RBP15.84■□□□□ 0.13
VSX1-202ENST00000376709 RPP21Q9H633 154 aaKnown RBP15.84■□□□□ 0.13
VSX1-202ENST00000376709 P01737 135 aa15.83■□□□□ 0.13
VSX1-202ENST00000376709 PRNTQ86SH4 94 aa15.83■□□□□ 0.13
VSX1-202ENST00000376709 DAZAP1Q96EP5 407 aaKnown RBP15.83■□□□□ 0.13
VSX1-202ENST00000376709 ATP6V0E1O15342 81 aa15.83■□□□□ 0.12
VSX1-202ENST00000376709 GOSR1O95249 250 aa15.83■□□□□ 0.12
VSX1-202ENST00000376709 Q0VG73 95 aa15.83■□□□□ 0.12
VSX1-202ENST00000376709 RASL11AQ6T310 242 aa15.83■□□□□ 0.12
VSX1-202ENST00000376709 SIGLEC15Q6ZMC9 328 aa15.83■□□□□ 0.12
VSX1-202ENST00000376709 LINC00322Q6ZN03 302 aaPredicted RBP15.83■□□□□ 0.12
VSX1-202ENST00000376709 LYPD1Q8N2G4 141 aa15.83■□□□□ 0.12
VSX1-202ENST00000376709 TMEM190Q8WZ59 177 aa15.83■□□□□ 0.12
VSX1-202ENST00000376709 APCSP02743 223 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 DEFA6Q01524 100 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 FAM110DQ8TAY7 271 aaPredicted RBP15.82■□□□□ 0.12
VSX1-202ENST00000376709 POLR3KQ9Y2Y1 108 aaPredicted RBP15.82■□□□□ 0.12
VSX1-202ENST00000376709 ABCA2Q9BZC7 2435 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 K7EQM0 130 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 MRPS12O15235 138 aaKnown RBP15.82■□□□□ 0.12
VSX1-202ENST00000376709 DDTP30046 118 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 ZNF664Q8N3J9 261 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 WIPF2Q8TF74 440 aaPredicted RBP15.82■□□□□ 0.12
VSX1-202ENST00000376709 ZNF414Q96IQ9 312 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 MS4A10Q96PG2 267 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 GNB4Q9HAV0 340 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 ZNF492Q9P255 531 aa15.82■□□□□ 0.12
VSX1-202ENST00000376709 IGLV2-11P01706 119 aa15.81■□□□□ 0.12
VSX1-202ENST00000376709 CTSGP08311 255 aa15.81■□□□□ 0.12
VSX1-202ENST00000376709 TPPP2P59282 170 aa15.81■□□□□ 0.12
VSX1-202ENST00000376709 TXN2Q99757 166 aa15.81■□□□□ 0.12
VSX1-202ENST00000376709 IGHV3OR16-10A0A075B7F0 116 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 IGHV4-61A0A0C4DH41 118 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 C19orf71A6NCJ1 209 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 A8MWL6 223 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 BMPR1BO00238 502 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 PAX8Q06710 450 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 IQCJQ1A5X6 159 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 C15orf32Q32M92 178 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 CIARTQ8N365 385 aaPredicted RBP15.8■□□□□ 0.12
VSX1-202ENST00000376709 PRSS22Q9GZN4 317 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 ESDP10768 282 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 SRIP30626 198 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 PAFAH1B2P68402 229 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 VN1R17PQ8TDU5 208 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 AAMDCQ9H7C9 122 aa15.8■□□□□ 0.12
VSX1-202ENST00000376709 UBR5O95071 2799 aaPredicted RBP15.8■□□□□ 0.12
VSX1-202ENST00000376709 SCGB1D1O95968 90 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 COL8A1P27658 744 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 SLAQ13239 276 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 PDE6HQ13956 83 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 CT83Q5H943 113 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 OR10J3Q5JRS4 329 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 TCF24Q7RTU0 167 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 TMEM75Q8N9X5 138 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 SPG11Q96JI7 2443 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 SH2D7A6NKC9 451 aaPredicted RBP15.79■□□□□ 0.12
VSX1-202ENST00000376709 CD33P20138 364 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 ATP5J2P56134 94 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 RHOGP84095 191 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 CLEC2AQ6UVW9 174 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 C10orf105Q8TEF2 133 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 C14orf144Q96I85 54 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 SPOCK3Q9BQ16 436 aa15.79■□□□□ 0.12
VSX1-202ENST00000376709 SAMD10Q9BYL1 202 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms