RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 ARPC5O15511 151 aa10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 CST7O76096 145 aa10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 CXCL2P19875 107 aa10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 EIF2B2P49770 351 aaKnown RBP10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 SUB1P53999 127 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 RPP30P78346 268 aaKnown RBP10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 RNF212Q495C1 297 aa10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 ZFP69Q49AA0 526 aa10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 MISP3Q96FF7 219 aa10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 HYLS1Q96M11 299 aa10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 CELA1Q9UNI1 258 aa10.67□□□□□ -0.7
CDKN1A-202ENST00000373711 TEX48A0A1B0GUV7 120 aa10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 C4BPBP20851 252 aa10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 NKX2-5P52952 324 aaPredicted RBP10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 ATP5IP56385 69 aaPredicted RBP10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 NUTF2P61970 127 aaKnown RBP10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 RAB11AP62491 216 aa10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 LGALSLQ3ZCW2 172 aaPredicted RBP10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 ZNF767PQ75MW2 155 aa10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 NARS2Q96I59 477 aaKnown RBP10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 AQP10Q96PS8 301 aa10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 SLC25A31Q9H0C2 315 aa10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 FNDC4Q9H6D8 234 aaPredicted RBP10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 HSPB11Q9Y547 144 aa10.66□□□□□ -0.7
CDKN1A-202ENST00000373711 NPBWR1P48145 328 aa10.65□□□□□ -0.7
CDKN1A-202ENST00000373711 SULT1A1P50225 295 aa10.65□□□□□ -0.7
CDKN1A-202ENST00000373711 AP2S1P53680 142 aaPredicted RBP10.65□□□□□ -0.7
CDKN1A-202ENST00000373711 OR8G2PQ6IF36 304 aa10.65□□□□□ -0.7
CDKN1A-202ENST00000373711 ZNF600Q6ZNG1 722 aa10.65□□□□□ -0.7
CDKN1A-202ENST00000373711 ACOT7LQ6ZUV0 252 aa10.65□□□□□ -0.7
CDKN1A-202ENST00000373711 STXBP6Q8NFX7 210 aa10.65□□□□□ -0.7
CDKN1A-202ENST00000373711 NACAE9PAV3 2078 aa10.65□□□□□ -0.7
CDKN1A-202ENST00000373711 TMEM189A5PLL7 270 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 I3L2K1 104 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 K7EQG2 157 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 SCGB2A1O75556 95 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 MT-CO2P00403 227 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 IGHV3-48P01763 117 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 SPART-AS1P0CW21 52 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 NUP62P37198 522 aaPredicted RBP10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 ACTL10Q5JWF8 245 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 TOMM20LQ6UXN7 152 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 Q8N1X5 172 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 FAM24BQ8N5W8 94 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 INO80EQ8NBZ0 244 aaPredicted RBP10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 OR10P1Q8NGE3 313 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 RNASEH2CQ8TDP1 164 aaKnown RBP10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 PINX1Q96BK5 328 aaKnown RBP10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 WFDC1Q9HC57 220 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 CLEC5AQ9NY25 188 aa10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 MRPL36Q9P0J6 103 aaKnown RBP10.64□□□□□ -0.71
CDKN1A-202ENST00000373711 IGHV3-66A0A0C4DH42 116 aa10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 NPPCP23582 126 aa10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 FAM3BP58499 235 aaPredicted RBP10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 SLC38A11Q08AI6 406 aa10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 STX12Q86Y82 276 aa10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 C9orf62Q8N4C0 152 aa10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 CSNK1G2-AS1Q8NCQ2 148 aa10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 SMIM3Q9BZL3 60 aa10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 PUS1Q9Y606 427 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDKN1A-202ENST00000373711 KNCNA6PVL3 124 aa10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 CORTO00230 105 aa10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 HNRNPCP07910 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 GPX4P36969 197 aaPredicted RBP10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 OPRK1P41145 380 aa10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 BAXQ07812 192 aa10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 OR2F1Q13607 317 aa10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 TMUB2Q71RG4 321 aa10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 OR1S2Q8NGQ3 325 aa10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 OR5C1Q8NGR4 320 aa10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 METTL26Q96S19 204 aa10.62□□□□□ -0.71
CDKN1A-202ENST00000373711 A0A0D9SG52 128 aa10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 APOHP02749 345 aaPredicted RBP10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 S100A11P31949 105 aa10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 DLK1P80370 383 aa10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 GAMTQ14353 236 aa10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 ZNF345Q14585 488 aa10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 CLINT1Q14677 625 aa10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 PPP1R14BQ96C90 147 aa10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 BOLA1Q9Y3E2 137 aa10.61□□□□□ -0.71
CDKN1A-202ENST00000373711 SMIM9A6NGZ8 99 aa10.6□□□□□ -0.71
CDKN1A-202ENST00000373711 HBG1P69891 147 aa10.6□□□□□ -0.71
CDKN1A-202ENST00000373711 HBG2P69892 147 aa10.6□□□□□ -0.71
CDKN1A-202ENST00000373711 ATP6V1FQ16864 119 aa10.6□□□□□ -0.71
CDKN1A-202ENST00000373711 LILRB2Q8N423 598 aa10.6□□□□□ -0.71
CDKN1A-202ENST00000373711 NEU1Q99519 415 aa10.6□□□□□ -0.71
CDKN1A-202ENST00000373711 SCRT1Q9BWW7 348 aa10.6□□□□□ -0.71
CDKN1A-202ENST00000373711 SCRT2Q9NQ03 307 aa10.6□□□□□ -0.71
CDKN1A-202ENST00000373711 CYTL1Q9NRR1 136 aa10.6□□□□□ -0.71
CDKN1A-202ENST00000373711 LRP1BQ9NZR2 4599 aa10.59□□□□□ -0.71
CDKN1A-202ENST00000373711 RPS10-NUDT3A0A1W2PQS6 291 aa10.59□□□□□ -0.71
CDKN1A-202ENST00000373711 HELTA6NFD8 242 aa10.59□□□□□ -0.71
CDKN1A-202ENST00000373711 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
CDKN1A-202ENST00000373711 VWC2Q2TAL6 325 aa10.59□□□□□ -0.71
CDKN1A-202ENST00000373711 ETFRF1Q6IPR1 90 aa10.59□□□□□ -0.71
CDKN1A-202ENST00000373711 NPIPB3Q92617 1050 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms