RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TCRBV4S1A1TA0A5B7 111 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 PRSS29PA6NIE9 313 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 PATE3B3GLJ2 98 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 SMKR1H3BMG3 65 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 M0R2P5 195 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 TEX45Q8NA69 505 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 COL11A2P13942 1736 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 BRWD3Q6RI45 1802 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 G3V4G9 280 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 FGF12P61328 243 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 TCF15Q12870 199 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 PNRC2Q9NPJ4 139 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 D6R8Y8 96 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 C17orf98A8MV24 154 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 Q9H3A6 140 aa9.23□□□□□ -0.93
CDC42BPA-205ENST00000366769 TLN2Q9Y4G6 2542 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 TMEM52Q8NDY8 209 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 MRPL32Q9BYC8 188 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 LGALS1P09382 135 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 OSTCQ9NRP0 149 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 ERG28Q9UKR5 140 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 TRAV8-3A0A0A6YYJ7 113 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 IGKV1D-13A0A0B4J2D9 117 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 IGKV1-13P0DP09 117 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 PYYP10082 97 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 DRAM1Q8N682 238 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 VWC2LB2RUY7 222 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 PSG4Q00888 419 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 IGHV3-73A0A0B4J1V6 119 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 IGKV1-8A0A0C4DH67 115 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 SIVA1O15304 175 aa9.22□□□□□ -0.93
CDC42BPA-205ENST00000366769 IGKV1D-42A0A075B6H8 117 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 STPG1Q5TH74 334 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 UCNP55089 124 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 PPP1R27Q86WC6 154 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 OR9G1Q8NH87 305 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 TMEM167AQ8TBQ9 72 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 NHSL1Q5SYE7 1610 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 J3QRE1 110 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 IGKV1D-33P01593 117 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 IGKV1-33P01594 117 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 FDCSPQ8NFU4 85 aa9.21□□□□□ -0.93
CDC42BPA-205ENST00000366769 NOTCH4Q99466 2003 aa9.21□□□□□ -0.94
CDC42BPA-205ENST00000366769 DTX2Q86UW9 622 aa9.21□□□□□ -0.94
CDC42BPA-205ENST00000366769 SIGLEC12Q96PQ1 595 aa9.21□□□□□ -0.94
CDC42BPA-205ENST00000366769 A0A087WX48 190 aa9.21□□□□□ -0.94
CDC42BPA-205ENST00000366769 A0A0U1RQV1 116 aa9.21□□□□□ -0.94
CDC42BPA-205ENST00000366769 RPL35AP18077 110 aaKnown RBP9.21□□□□□ -0.94
CDC42BPA-205ENST00000366769 LYPD6BQ8NI32 183 aa9.21□□□□□ -0.94
CDC42BPA-205ENST00000366769 K7EMI3 77 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 C15orf53Q8NAA6 179 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 C18orf32Q8TCD1 76 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 TLN1Q9Y490 2541 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 PRR19A6NJB7 356 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 OR9G9P0C7N8 305 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 PRR33A8MZF0 331 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 WNT2P09544 360 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 LINC01590Q5TEZ4 76 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 PPP1R32Q7Z5V6 425 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 ASCL2Q99929 193 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 COL18A1P39060 1754 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 NPIPB5A8MRT5 1133 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 NBEAP1P0C6P0 100 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 LAGE3Q14657 143 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 TP73-AS1Q9UF72 201 aa9.2□□□□□ -0.94
CDC42BPA-205ENST00000366769 ACACBO00763 2458 aa9.19□□□□□ -0.94
CDC42BPA-205ENST00000366769 PAX1P15863 534 aa9.19□□□□□ -0.94
CDC42BPA-205ENST00000366769 C9orf40Q8IXQ3 194 aa9.19□□□□□ -0.94
CDC42BPA-205ENST00000366769 ZNF319Q9P2F9 582 aa9.19□□□□□ -0.94
CDC42BPA-205ENST00000366769 NRXN2Q9P2S2 1712 aa9.19□□□□□ -0.94
CDC42BPA-205ENST00000366769 ZNF146Q15072 292 aa9.19□□□□□ -0.94
CDC42BPA-205ENST00000366769 GFRA3O60609 400 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 SRSF2Q01130 221 aaKnown RBP9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 C21orf62Q9NYP8 219 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 MMP23AO75900 390 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 LYL1P12980 280 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 DUX4L9Q6RFH8 374 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 DLL3Q9NYJ7 618 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 FAM214BQ7L5A3 538 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 Q0VG73 95 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 FAM168AQ92567 244 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 SFXN3Q9BWM7 321 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 CFHR5Q9BXR6 569 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 COL5A3P25940 1745 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 AHRRA9YTQ3 701 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 MRPL27Q9P0M9 148 aaKnown RBP9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 ZNF721Q8TF20 911 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 ANKHD1Q8IWZ3 2542 aaKnown RBP9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 CTSBP07858 339 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 COX8AP10176 69 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 ZNRF1Q8ND25 227 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 C7orf69Q9H7B7 122 aa9.18□□□□□ -0.94
CDC42BPA-205ENST00000366769 CIARTQ8N365 385 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 IGFBP3P17936 291 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 COLCA1Q6ZS62 124 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 PRADC1Q9BSG0 188 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 PEMTQ9UBM1 199 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 EGR4Q05215 589 aa9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 RBMY1FQ15415 496 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-205ENST00000366769 SPANXA1Q9NS26 97 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 211.2 ms