RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 MBD3L5A6NJ08 208 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 IGHV1-8P0DP01 117 aa9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 ZNF329Q86UD4 541 aa9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 MBD3L2Q8NHZ7 208 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 PYGO2Q9BRQ0 406 aa9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 FOXG1P55316 489 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 COLQQ9Y215 455 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 CD5LO43866 347 aa9.65□□□□□ -0.87
CDC42BPA-202ENST00000366764 Q8TCH9 128 aa9.65□□□□□ -0.87
CDC42BPA-202ENST00000366764 RNASE6Q93091 150 aaKnown RBP9.65□□□□□ -0.87
CDC42BPA-202ENST00000366764 H3BRM9 83 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 CEACAM4O75871 244 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 IGKCP01834 107 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 WIPF3A6NGB9 483 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 C19orf54Q5BKX5 351 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 ZNF524Q96C55 264 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 ZNF56Q15929 161 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 C18orf32Q8TCD1 76 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 SNHG12Q9BXW3 62 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 KLK15Q9H2R5 256 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 DDB2Q92466 427 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 TMEM178BH3BS89 294 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 TRGV3P03979 118 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 PSG1P11464 419 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 VDAC2P45880 294 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 RAX2Q96IS3 184 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 SMIM27A0A1W2PRY6 76 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 M0R381 172 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 SAMD5Q5TGI4 173 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 TRAV3A0A0B4J244 114 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 CGB1A6NKQ9 187 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 MINOS1Q5TGZ0 78 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 TMEM75Q8N9X5 138 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 WIPF2Q8TF74 440 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 MINOS1-NBL1R4GNA1 71 aa9.64□□□□□ -0.87
CDC42BPA-202ENST00000366764 IGHV2-26A0A0B4J1V2 119 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 POU2AF1Q16633 256 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 ZNF726P1Q15940 193 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 NAV2Q8IVL1 2488 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 IGKV3-7A0A075B6H7 116 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 TFPI2P48307 235 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 Q86TA4 180 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 TRAV21A0A0B4J279 112 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 KRTAP27-1Q3LI81 207 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 TMEM170BQ5T4T1 132 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 MYOD1P15172 320 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 SPTBN4Q9H254 2564 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 KIR2DL5BA0A0G2JN68 375 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 KIR2DL5BA0A0G2JPC4 375 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 EREGO14944 169 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 PSG3Q16557 428 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 KIR2DL5AQ8N109 375 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 NDUFA4L2Q9NRX3 87 aa9.63□□□□□ -0.87
CDC42BPA-202ENST00000366764 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 PROK2Q9HC23 129 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 GAFA1Q96PS6 74 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 OVOL1O14753 267 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 KLF17Q5JT82 389 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 TMEM200BQ69YZ2 307 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 V9GYV3 84 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 M0R1W7 72 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 SIGLEC9Q9Y336 463 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 SIGMAR1Q99720 223 aa9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 NHP2Q9NX24 153 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-202ENST00000366764 TRAV5A0A0B4J249 113 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 VKORC1Q9BQB6 163 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 PTPRSQ13332 1948 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 SHANK2-AS3Q9BTD1 123 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 TMEM14CQ9P0S9 112 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 PMS2P5A8MQ11 134 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 A6NNC1 897 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 D6R8Y8 96 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 DNAL4O96015 105 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 Q6ZWC4 215 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 H7C2G1 150 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 IGLC2P0DOY2 106 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 IGLC3P0DOY3 106 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 ADIPOQQ15848 244 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 ZNF479Q96JC4 524 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 LCN12Q6JVE5 192 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 RHOGP84095 191 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 C5orf64Q2M2E5 130 aa9.61□□□□□ -0.87
CDC42BPA-202ENST00000366764 IGHV1-3A0A0C4DH29 117 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 GUSBP1Q15486 140 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 HTN1P15515 57 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 LINC00311Q8N616 119 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 GAGE13Q4V321 117 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 SCRT1Q9BWW7 348 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 TIMM23O14925 209 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 KLRB1Q12918 225 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 MPV17L2Q567V2 206 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 FNDC4Q9H6D8 234 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 EP400Q96L91 3159 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 WISP1O95388 367 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 FAM74A4Q5TZK3 123 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 SPANXA1Q9NS26 97 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 SNAI2O43623 268 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 CD59P13987 128 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms