RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 LIMS3P0CW19 117 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 LIMS4P0CW20 117 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 MYL9P24844 172 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 ZNF93P35789 620 aaPredicted RBP3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 TALDO1P37837 337 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 RPS11P62280 158 aaKnown RBP eCLIP3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 SNRPGP62308 76 aaKnown RBP3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 FLOT2Q14254 428 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 MPV17LQ2QL34 196 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 DEFB114Q30KQ6 69 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 MPV17L2Q567V2 206 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 SLC16A13Q7RTY0 426 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 SYS1Q8N2H4 156 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 Q8N402 240 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 ACBD7Q8N6N7 88 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 TCTEX1D1Q8N7M0 179 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 DRAXINQ8NBI3 349 aaPredicted RBP3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 OR5AK2Q8NH90 309 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 ABHD14BQ96IU4 210 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 YPEL2Q96QA6 119 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 GPER1Q99527 375 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 PRRG3Q9BZD7 231 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 CST11Q9H112 138 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 METTL9Q9H1A3 318 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 BANF2Q9H503 90 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 TRAPPC2LQ9UL33 140 aa3.36□□□□□ -1.87
RNU4-39P-201ENST00000362455 IGKV1-6A0A0C4DH72 117 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 TMEM212A6NML5 194 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 OR11H12B2RN74 326 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 KRBOX1C9JBD0 128 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 MCRIP1C9JLW8 97 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 HLA-AP01891 365 aaKnown RBP3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 PRH1P02810 166 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 MAS1P04201 325 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 RPSAP08865 295 aaKnown RBP3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 APELAP0DMC3 54 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 GTF2F2P13984 249 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 GNGT1P63211 74 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 TNFRSF9Q07011 255 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 TMEM267Q0VDI3 215 aaPredicted RBP3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 FXYD3Q14802 87 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 HMGN3Q15651 99 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 C6orf183Q5T699 404 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 OR10K2Q6IF99 312 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 ZNF880Q6PDB4 577 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 GLIPR1L1Q6UWM5 242 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 LINC00596Q86U02 117 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 LGI3Q8N145 548 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 GRPEL2Q8TAA5 225 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 NEK7Q8TDX7 302 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 MRPS24Q96EL2 167 aaKnown RBP3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 SULT4A1Q9BR01 284 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 TMEM138Q9NPI0 162 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 METTL1Q9UBP6 276 aaKnown RBP3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 JPT1Q9UK76 154 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 ERGIC3Q9Y282 383 aa3.35□□□□□ -1.87
RNU4-39P-201ENST00000362455 APOBP04114 4563 aaKnown RBP3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 DNAH5Q8TE73 4624 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 C2orf70A6NJV1 201 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 CENPXA8MT69 81 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 NDUFC2-KCTD14E9PQ53 114 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 OR2A4O95047 310 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 CNIH1O95406 144 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 NAPSAO96009 420 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 STAG3L2P0CL84 134 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 ETV1P50549 477 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 OR2B8PP59922 312 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 HSP90B2PQ58FF3 399 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 LGALS9CQ6DKI2 356 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 LYG2Q86SG7 212 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 STX19Q8N4C7 294 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 UBAC2Q8NBM4 344 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 OR2K2Q8NGT1 345 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 BAALCQ8WXS3 180 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 CACNG8Q8WXS5 425 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 FRZBQ92765 325 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 GHSRQ92847 366 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 RNF5Q99942 180 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 FAAP24Q9BTP7 215 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 TMEM243Q9BU79 118 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 GGTLC1Q9BX51 225 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 CLEC2DQ9UHP7 191 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 ZNF230Q9UIE0 474 aaPredicted RBP3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 WASHC3Q9Y3C0 194 aa3.34□□□□□ -1.87
RNU4-39P-201ENST00000362455 A0A1B0GW64 132 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 TMEM213A2RRL7 107 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 OR5H14A6NHG9 310 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 PPP5D1E7EU14 171 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 E7EUB6 86 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 H3BUA1 57 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 H7C2Y5 167 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 ITGB1BP1O14713 200 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 GYG2O15488 501 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 PDCD6O75340 191 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 RBBP9O75884 186 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 S1PR2O95136 353 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 SCTP09683 121 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 HTR2CP28335 458 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 QRFPP83859 136 aa3.33□□□□□ -1.88
RNU4-39P-201ENST00000362455 INSL4Q14641 139 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms