RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TRGV9Q99603 122 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 PCNX1Q96RV3 2341 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 PRR20EP86478 221 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 PRR20CP86479 221 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 PRR20DP86480 221 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 PRR20BP86481 221 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 PRR20AP86496 221 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 CHAC1Q9BUX1 264 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 SLC25A39Q9BZJ4 359 aaPredicted RBP13□□□□□ -0.33
CLSTN1-201ENST00000361311 ZNF503-AS2A6NEH8 195 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 F2RL2O00254 374 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 RAB9AP51151 201 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 TMEM167AQ8TBQ9 72 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 CSTL1Q9H114 145 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 IGHV3-23P01764 117 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 KLF17Q5JT82 389 aaPredicted RBP13□□□□□ -0.33
CLSTN1-201ENST00000361311 FGF23Q9GZV9 251 aaPredicted RBP13□□□□□ -0.33
CLSTN1-201ENST00000361311 C21orf62Q9NYP8 219 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 FREM1Q5H8C1 2179 aa12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 IGHV1-18A0A0C4DH31 117 aa12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 PVRIGQ6DKI7 326 aa12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 Q86TA4 180 aa12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 KIR3DL3Q8N743 410 aa12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 ZNF492Q9P255 531 aa12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 SPRR3Q9UBC9 169 aa12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 TSSC4Q9Y5U2 329 aaPredicted RBP12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 KIR2DL4Q99706 377 aa12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 SLC25A2Q9BXI2 301 aa12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 ZFHX2Q9C0A1 2572 aaPredicted RBP12.99□□□□□ -0.33
CLSTN1-201ENST00000361311 FAM90A27PA6NNH2 459 aa12.98□□□□□ -0.33
CLSTN1-201ENST00000361311 MUC6Q6W4X9 2439 aa12.98□□□□□ -0.33
CLSTN1-201ENST00000361311 ETDBQ3ZM63 59 aa12.98□□□□□ -0.33
CLSTN1-201ENST00000361311 EP400Q96L91 3159 aa12.98□□□□□ -0.33
CLSTN1-201ENST00000361311 SMKR1H3BMG3 65 aa12.98□□□□□ -0.33
CLSTN1-201ENST00000361311 PLA2G5P39877 138 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 IGHV3-49A0A0A0MS15 119 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 A8MWV9 139 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 TMEM262E9PQX1 116 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 CFHR2P36980 270 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 SRSF1Q07955 248 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 KLF5Q13887 457 aaPredicted RBP12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 WIPF2Q8TF74 440 aaPredicted RBP12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 ZNF815PA8K554 130 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 SAP30O75446 220 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 TMPRSS3P57727 454 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 FAM27E3Q08E93 113 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 PRSS57Q6UWY2 283 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 ASCL2Q99929 193 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 TMEM105Q8N8V8 129 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 THADAQ6YHU6 1953 aa12.97□□□□□ -0.33
CLSTN1-201ENST00000361311 KIF26AQ9ULI4 1882 aaPredicted RBP12.96□□□□□ -0.33
CLSTN1-201ENST00000361311 A0A1W2PPM0 123 aa12.96□□□□□ -0.33
CLSTN1-201ENST00000361311 PRB3Q04118 309 aaPredicted RBP12.96□□□□□ -0.33
CLSTN1-201ENST00000361311 ZCCHC24Q8N2G6 241 aaKnown RBP12.96□□□□□ -0.34
CLSTN1-201ENST00000361311 GOLGB1Q14789 3259 aaKnown RBP12.96□□□□□ -0.34
CLSTN1-201ENST00000361311 MED13LQ71F56 2210 aa12.96□□□□□ -0.34
CLSTN1-201ENST00000361311 IGHV3-66A0A0C4DH42 116 aa12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 H0YJW9 148 aa12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 HTN1P15515 57 aa12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 JMJD8Q96S16 334 aa12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 OBSL1O75147 1896 aa12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 IGKV2-40A0A087WW87 121 aaPredicted RBP12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 NTN3O00634 580 aaPredicted RBP12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 TAX1BP3O14907 124 aa12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 IGKV2D-40P01614 121 aaPredicted RBP12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 SPINK8P0C7L1 97 aa12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 CRIP3Q6Q6R5 217 aa12.95□□□□□ -0.34
CLSTN1-201ENST00000361311 RNF138Q8WVD3 245 aa12.94□□□□□ -0.34
CLSTN1-201ENST00000361311 CHTOPQ9Y3Y2 248 aaKnown RBP12.94□□□□□ -0.34
CLSTN1-201ENST00000361311 NUP210Q8TEM1 1887 aaPredicted RBP12.94□□□□□ -0.34
CLSTN1-201ENST00000361311 LINC00173Q6ZV60 143 aa12.94□□□□□ -0.34
CLSTN1-201ENST00000361311 C17orf100A8MU93 164 aa12.94□□□□□ -0.34
CLSTN1-201ENST00000361311 AZU1P20160 251 aa12.94□□□□□ -0.34
CLSTN1-201ENST00000361311 TMEM158Q8WZ71 300 aa12.94□□□□□ -0.34
CLSTN1-201ENST00000361311 KIAA1549LQ6ZVL6 1849 aa12.94□□□□□ -0.34
CLSTN1-201ENST00000361311 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 LGALS9CQ6DKI2 356 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 Q6ZPA2 131 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 ZFAND6Q6FIF0 208 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 TMEM133Q9H2Q1 129 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 ZNRD1Q9P1U0 126 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 TMEM213A2RRL7 107 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 C9orf172C9J069 976 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 SH2D1AO60880 128 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 IGHV1-46P01743 117 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 FAM74A4Q5TZK3 123 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 ZNF295-AS1Q8N0V1 137 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 DPM3Q9P2X0 92 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 C15orf65H3BRN8 121 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 PPP1R17O96001 155 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 UCNP55089 124 aa12.93□□□□□ -0.34
CLSTN1-201ENST00000361311 GAGE12HA6NDE8 117 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 ZNF134P52741 427 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 GAGE2BQ13066 116 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 LAGE3Q14657 143 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
CLSTN1-201ENST00000361311 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms