RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 GGCTO75223 188 aaKnown RBP13.1□□□□□ -0.31
TPM1-205ENST00000357980 CRLF1O75462 422 aa13.1□□□□□ -0.31
TPM1-205ENST00000357980 UNQ9165/PRO28630Q6UXU0 137 aa13.1□□□□□ -0.31
TPM1-205ENST00000357980 BPIFA4PQ86YQ2 179 aa13.1□□□□□ -0.31
TPM1-205ENST00000357980 LGALS1P09382 135 aaKnown RBP13.09□□□□□ -0.31
TPM1-205ENST00000357980 NBEAP1P0C6P0 100 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 IGLC2P0DOY2 106 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 CEBPGP53567 150 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 LINC01006Q8NI28 216 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 H3BQ15 152 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 SNRPCP09234 159 aaKnown RBP13.09□□□□□ -0.31
TPM1-205ENST00000357980 HIST1H1EP10412 219 aaKnown RBP13.09□□□□□ -0.31
TPM1-205ENST00000357980 NPPCP23582 126 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 CRYBB3P26998 211 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 S100A7P31151 101 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 ZNF586Q9NXT0 402 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 RNF24Q9Y225 148 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 U3KQE9 123 aa13.09□□□□□ -0.31
TPM1-205ENST00000357980 F6UZH7 168 aa13.08□□□□□ -0.32
TPM1-205ENST00000357980 BUB3O43684 328 aa13.08□□□□□ -0.32
TPM1-205ENST00000357980 NDUFA7O95182 113 aa13.08□□□□□ -0.32
TPM1-205ENST00000357980 SVBPQ8N300 66 aa13.08□□□□□ -0.32
TPM1-205ENST00000357980 BLNKQ8WV28 456 aa13.08□□□□□ -0.32
TPM1-205ENST00000357980 TMEM190Q8WZ59 177 aa13.08□□□□□ -0.32
TPM1-205ENST00000357980 METTL26Q96S19 204 aa13.08□□□□□ -0.32
TPM1-205ENST00000357980 MYCNOSP40205 109 aa13.07□□□□□ -0.32
TPM1-205ENST00000357980 C11orf52Q96A22 123 aa13.07□□□□□ -0.32
TPM1-205ENST00000357980 C20orf24Q9BUV8 137 aa13.07□□□□□ -0.32
TPM1-205ENST00000357980 NKX6-2Q9C056 277 aaPredicted RBP13.07□□□□□ -0.32
TPM1-205ENST00000357980 SCO2A0A1W2PP80 73 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 ZNF207O43670 478 aaKnown RBP13.06□□□□□ -0.32
TPM1-205ENST00000357980 TCF21O43680 179 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 APOHP02749 345 aaPredicted RBP13.06□□□□□ -0.32
TPM1-205ENST00000357980 RPL7P18124 248 aaKnown RBP13.06□□□□□ -0.32
TPM1-205ENST00000357980 CDX1P47902 265 aaPredicted RBP13.06□□□□□ -0.32
TPM1-205ENST00000357980 GPHB5Q86YW7 130 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 OR4F17Q8NGA8 305 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 TRBV19A0A075B6N1 114 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 H3BTX0 84 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 SUMO1P63165 101 aaKnown RBP13.06□□□□□ -0.32
TPM1-205ENST00000357980 C1orf194Q5T5A4 169 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 OR8I2Q8N0Y5 310 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 ELOVL1Q9BW60 279 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 PARLQ9H300 379 aa13.06□□□□□ -0.32
TPM1-205ENST00000357980 NDUFB4O95168 129 aa13.05□□□□□ -0.32
TPM1-205ENST00000357980 RANP62826 216 aaKnown RBP13.05□□□□□ -0.32
TPM1-205ENST00000357980 ATRAIDQ6UW56 229 aa13.05□□□□□ -0.32
TPM1-205ENST00000357980 C18orf65Q6ZTR6 163 aa13.05□□□□□ -0.32
TPM1-205ENST00000357980 RPUSD4Q96CM3 377 aaKnown RBP13.05□□□□□ -0.32
TPM1-205ENST00000357980 C17orf77Q96MU5 243 aa13.05□□□□□ -0.32
TPM1-205ENST00000357980 SETD2Q9BYW2 2564 aaPredicted RBP13.04□□□□□ -0.32
TPM1-205ENST00000357980 C4orf3Q8WVX3 66 aa13.04□□□□□ -0.32
TPM1-205ENST00000357980 SMIM7Q9BQ49 75 aa13.04□□□□□ -0.32
TPM1-205ENST00000357980 DERL1Q9BUN8 251 aa13.04□□□□□ -0.32
TPM1-205ENST00000357980 SMAD5-AS1Q9Y6J3 95 aa13.04□□□□□ -0.32
TPM1-205ENST00000357980 IGHV4OR15-8A0A075B7B6 117 aa13.04□□□□□ -0.32
TPM1-205ENST00000357980 A0A087WW49 117 aa13.04□□□□□ -0.32
TPM1-205ENST00000357980 RPEL1Q2QD12 228 aa13.04□□□□□ -0.32
TPM1-205ENST00000357980 NIPSNAP3BQ9BS92 247 aa13.04□□□□□ -0.32
TPM1-205ENST00000357980 IGHV3-49A0A0A0MS15 119 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 IGHV3-66A0A0C4DH42 116 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 ZNF320A2RRD8 509 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 ZNF727A8MUV8 499 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 SLC17A3O00476 420 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 SNAPINO95295 136 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 PDE6HQ13956 83 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 FAM106AQ4KMX7 169 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 C2CD4CQ8TF44 421 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 WFDC12Q8WWY7 111 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 GPR82Q96P67 336 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 Q9H3A6 140 aa13.03□□□□□ -0.32
TPM1-205ENST00000357980 DAZ1Q9NQZ3 744 aaKnown RBP13.03□□□□□ -0.32
TPM1-205ENST00000357980 IGHV3OR16-13A0A075B7E8 117 aa13.02□□□□□ -0.32
TPM1-205ENST00000357980 IGHV3-74A0A0B4J1X5 117 aa13.02□□□□□ -0.32
TPM1-205ENST00000357980 SCO1O75880 301 aa13.02□□□□□ -0.32
TPM1-205ENST00000357980 ZNF674Q2M3X9 581 aa13.02□□□□□ -0.32
TPM1-205ENST00000357980 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.32
TPM1-205ENST00000357980 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.32
TPM1-205ENST00000357980 TCEAL7Q9BRU2 100 aa13.02□□□□□ -0.32
TPM1-205ENST00000357980 OTORQ9NRC9 128 aa13.02□□□□□ -0.32
TPM1-205ENST00000357980 A0A087X0K7 114 aa13.02□□□□□ -0.33
TPM1-205ENST00000357980 PGPA6NDG6 321 aa13.02□□□□□ -0.33
TPM1-205ENST00000357980 K7EMT4 169 aa13.02□□□□□ -0.33
TPM1-205ENST00000357980 SRSF2Q01130 221 aaKnown RBP13.02□□□□□ -0.33
TPM1-205ENST00000357980 TM4SF20Q53R12 229 aa13.02□□□□□ -0.33
TPM1-205ENST00000357980 C16orf54Q6UWD8 224 aa13.02□□□□□ -0.33
TPM1-205ENST00000357980 LYPD1Q8N2G4 141 aa13.02□□□□□ -0.33
TPM1-205ENST00000357980 GLMPQ8WWB7 406 aa13.02□□□□□ -0.33
TPM1-205ENST00000357980 C2CD3Q4AC94 2353 aa13.01□□□□□ -0.33
TPM1-205ENST00000357980 NIPBLQ6KC79 2804 aaeCLIP13.01□□□□□ -0.33
TPM1-205ENST00000357980 TRBV20OR9-2A0A075B6H5 130 aa13.01□□□□□ -0.33
TPM1-205ENST00000357980 CD28P10747 220 aa13.01□□□□□ -0.33
TPM1-205ENST00000357980 HOXD3P31249 432 aaPredicted RBP13.01□□□□□ -0.33
TPM1-205ENST00000357980 PROK1P58294 105 aa13.01□□□□□ -0.33
TPM1-205ENST00000357980 DEFB136Q30KP8 78 aa13.01□□□□□ -0.33
TPM1-205ENST00000357980 KHDC1LQ5JSQ8 128 aa13.01□□□□□ -0.33
TPM1-205ENST00000357980 REC114Q7Z4M0 266 aa13.01□□□□□ -0.33
TPM1-205ENST00000357980 RNF114Q9Y508 228 aa13.01□□□□□ -0.33
TPM1-205ENST00000357980 IGHV7-4-1A0A0J9YVY3 117 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms