RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 C16orf92Q96LL3 132 aa14.15□□□□□ -0.14
SYNE4-202ENST00000340477 LINC00052Q96N35 136 aa14.15□□□□□ -0.14
SYNE4-202ENST00000340477 RSG1Q9BU20 258 aa14.15□□□□□ -0.14
SYNE4-202ENST00000340477 KNCNA6PVL3 124 aa14.14□□□□□ -0.15
SYNE4-202ENST00000340477 CA1P00915 261 aaPredicted RBP14.14□□□□□ -0.15
SYNE4-202ENST00000340477 SPP1P10451 314 aa14.14□□□□□ -0.15
SYNE4-202ENST00000340477 TMEM41BQ5BJD5 291 aa14.14□□□□□ -0.15
SYNE4-202ENST00000340477 C10orf113Q5VZT2 155 aa14.14□□□□□ -0.15
SYNE4-202ENST00000340477 MORN3Q6PF18 240 aaPredicted RBP14.14□□□□□ -0.15
SYNE4-202ENST00000340477 OR1L4Q8NGR5 311 aa14.14□□□□□ -0.15
SYNE4-202ENST00000340477 UHRF2Q96PU4 802 aa14.14□□□□□ -0.15
SYNE4-202ENST00000340477 PFDN5Q99471 154 aa14.14□□□□□ -0.15
SYNE4-202ENST00000340477 OVOL2Q9BRP0 275 aa14.14□□□□□ -0.15
SYNE4-202ENST00000340477 H0YIZ8 118 aa14.13□□□□□ -0.15
SYNE4-202ENST00000340477 C3orf84H3BNL1 204 aa14.13□□□□□ -0.15
SYNE4-202ENST00000340477 NHLH2Q02577 135 aa14.13□□□□□ -0.15
SYNE4-202ENST00000340477 LINC00305Q7Z4B0 112 aa14.13□□□□□ -0.15
SYNE4-202ENST00000340477 MUC7Q8TAX7 377 aa14.13□□□□□ -0.15
SYNE4-202ENST00000340477 THAP6Q8TBB0 222 aa14.13□□□□□ -0.15
SYNE4-202ENST00000340477 GATAD1Q8WUU5 269 aa14.13□□□□□ -0.15
SYNE4-202ENST00000340477 RNF183Q96D59 192 aa14.13□□□□□ -0.15
SYNE4-202ENST00000340477 KCNIP2Q9NS61 270 aa14.13□□□□□ -0.15
SYNE4-202ENST00000340477 B2MP61769 119 aa14.12□□□□□ -0.15
SYNE4-202ENST00000340477 NUTF2P61970 127 aaKnown RBP14.12□□□□□ -0.15
SYNE4-202ENST00000340477 CLINT1Q14677 625 aa14.12□□□□□ -0.15
SYNE4-202ENST00000340477 MIC13Q5XKP0 118 aa14.12□□□□□ -0.15
SYNE4-202ENST00000340477 TRPT1Q86TN4 253 aaKnown RBP14.12□□□□□ -0.15
SYNE4-202ENST00000340477 EDA2RQ9HAV5 297 aa14.12□□□□□ -0.15
SYNE4-202ENST00000340477 MBD2Q9UBB5 411 aa14.12□□□□□ -0.15
SYNE4-202ENST00000340477 RPL29P47914 159 aaKnown RBP14.11□□□□□ -0.15
SYNE4-202ENST00000340477 FGL1Q08830 312 aa14.11□□□□□ -0.15
SYNE4-202ENST00000340477 OPCMLQ14982 345 aa14.11□□□□□ -0.15
SYNE4-202ENST00000340477 ZNF709Q8N972 641 aa14.11□□□□□ -0.15
SYNE4-202ENST00000340477 IL17DQ8TAD2 202 aa14.11□□□□□ -0.15
SYNE4-202ENST00000340477 LRRC20Q8TCA0 184 aa14.11□□□□□ -0.15
SYNE4-202ENST00000340477 RPRMQ9NS64 109 aa14.11□□□□□ -0.15
SYNE4-202ENST00000340477 PXMP4Q9Y6I8 212 aa14.11□□□□□ -0.15
SYNE4-202ENST00000340477 SOCS3O14543 225 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 LYL1P12980 280 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 FCN2Q15485 313 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 SPATA31B1PQ5VZV4 182 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 EBLN2Q6P2I7 272 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 FOXI2Q6ZQN5 318 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 BPIFA4PQ86YQ2 179 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 CHAC2Q8WUX2 184 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 ASB13Q8WXK3 278 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 NPCDR1Q9BY65 106 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 DNAJC4Q9NNZ3 241 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 SLC39A9Q9NUM3 307 aa14.1□□□□□ -0.15
SYNE4-202ENST00000340477 C17orf112F2Z3M2 114 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 HLA-DRB4P13762 266 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 CXCL3P19876 107 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 RPL12P30050 165 aaKnown RBP14.09□□□□□ -0.15
SYNE4-202ENST00000340477 PRR20EP86478 221 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 PRR20CP86479 221 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 PRR20DP86480 221 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 PRR20BP86481 221 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 PRR20AP86496 221 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 PATE2Q6UY27 113 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 ATP5SQ99766 215 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 RNF126Q9BV68 326 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 C1QTNF4Q9BXJ3 329 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 HSPB11Q9Y547 144 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 HLA-DRB4X5D2U9 266 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 AGRNO00468 2067 aa14.09□□□□□ -0.15
SYNE4-202ENST00000340477 IFNA5P01569 189 aa14.08□□□□□ -0.16
SYNE4-202ENST00000340477 SAV1Q9H4B6 383 aaPredicted RBP14.08□□□□□ -0.16
SYNE4-202ENST00000340477 A0A087X0K7 114 aa14.07□□□□□ -0.16
SYNE4-202ENST00000340477 H3BMM0 161 aa14.07□□□□□ -0.16
SYNE4-202ENST00000340477 LCN15Q6UWW0 184 aa14.07□□□□□ -0.16
SYNE4-202ENST00000340477 TMEM37Q8WXS4 190 aa14.07□□□□□ -0.16
SYNE4-202ENST00000340477 RARRES2Q99969 163 aa14.07□□□□□ -0.16
SYNE4-202ENST00000340477 GIPP09681 153 aaPredicted RBP14.06□□□□□ -0.16
SYNE4-202ENST00000340477 CXCL2P19875 107 aa14.06□□□□□ -0.16
SYNE4-202ENST00000340477 OXA1LQ15070 435 aa14.06□□□□□ -0.16
SYNE4-202ENST00000340477 OR11H7Q8NGC8 314 aa14.06□□□□□ -0.16
SYNE4-202ENST00000340477 OR4B1Q8NGF8 309 aa14.06□□□□□ -0.16
SYNE4-202ENST00000340477 SCGB1C1Q8TD33 95 aa14.06□□□□□ -0.16
SYNE4-202ENST00000340477 WDR61Q9GZS3 305 aaKnown RBP14.06□□□□□ -0.16
SYNE4-202ENST00000340477 ZNF738Q8NE65 137 aa14.05□□□□□ -0.16
SYNE4-202ENST00000340477 OR11H2Q8NH07 326 aa14.05□□□□□ -0.16
SYNE4-202ENST00000340477 SLC50A1Q9BRV3 221 aa14.05□□□□□ -0.16
SYNE4-202ENST00000340477 SMIM3Q9BZL3 60 aa14.05□□□□□ -0.16
SYNE4-202ENST00000340477 A0A0J9YWU9 116 aa14.04□□□□□ -0.16
SYNE4-202ENST00000340477 IGKV3-20P01619 116 aa14.04□□□□□ -0.16
SYNE4-202ENST00000340477 C4BPBP20851 252 aa14.04□□□□□ -0.16
SYNE4-202ENST00000340477 GDF5OSQ5U4N7 250 aa14.03□□□□□ -0.16
SYNE4-202ENST00000340477 C20orf173Q96LM9 149 aa14.03□□□□□ -0.16
SYNE4-202ENST00000340477 DNAH7Q8WXX0 4024 aa14.03□□□□□ -0.16
SYNE4-202ENST00000340477 A0A0J9YX75 114 aa14.02□□□□□ -0.17
SYNE4-202ENST00000340477 DUSP14O95147 198 aaKnown RBP14.02□□□□□ -0.17
SYNE4-202ENST00000340477 GUK1Q16774 197 aa14.02□□□□□ -0.17
SYNE4-202ENST00000340477 FAM78BQ5VT40 261 aa14.02□□□□□ -0.17
SYNE4-202ENST00000340477 ZFAND6Q6FIF0 208 aa14.02□□□□□ -0.17
SYNE4-202ENST00000340477 RNF182Q8N6D2 247 aa14.02□□□□□ -0.17
SYNE4-202ENST00000340477 CLUHP3Q96NS8 147 aa14.02□□□□□ -0.17
SYNE4-202ENST00000340477 CLEC5AQ9NY25 188 aa14.02□□□□□ -0.17
SYNE4-202ENST00000340477 TRAV8-2A0A0B4J237 113 aa14.01□□□□□ -0.17
SYNE4-202ENST00000340477 F6UB75 175 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms