RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PFN1P07737 140 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 HIST1H1EP10412 219 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 IER3P46695 156 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 CRIP2P52943 208 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 TEX38Q6PEX7 206 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 EXOC3-AS1Q8N2X6 119 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 EEF1AKMT3Q96AZ1 226 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 OR5B12Q96R08 314 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 ATP5G2Q06055 141 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 TMEM95Q3KNT9 176 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 FAM210BQ96KR6 192 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 EPDR1Q9UM22 224 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 PDZD2O15018 2839 aa17.41■□□□□ 0.38
PDLIM2-203ENST00000339162 SMAD7O15105 426 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 SCGB2A1O75556 95 aa17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 LCNL1Q6ZST4 164 aa17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 IGF2BP2-AS1Q96M15 143 aa17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 PPP5D1E7EU14 171 aa17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 ISLRO14498 428 aa17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 FSHBP01225 129 aa17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 SMIM6P0DI80 62 aa17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 FAM3BP58499 235 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 CYB5R2Q6BCY4 276 aa17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 TOMM20LQ6UXN7 152 aa17.4■□□□□ 0.38
PDLIM2-203ENST00000339162 IGLV2-8P01709 118 aa17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 PPIFP30405 207 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 CNN1P51911 297 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 TPPP2P59282 170 aa17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 OR4F17Q8NGA8 305 aa17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 A0A1W2PPQ1 181 aa17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 MRPS12O15235 138 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 IGLC2P0DOY2 106 aa17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 MGST1P10620 155 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 RPL15P61313 204 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 KLK15Q9H2R5 256 aa17.39■□□□□ 0.37
PDLIM2-203ENST00000339162 SLC17A3O00476 420 aa17.38■□□□□ 0.37
PDLIM2-203ENST00000339162 OR10G8Q8NGN5 311 aa17.38■□□□□ 0.37
PDLIM2-203ENST00000339162 RABAC1Q9UI14 185 aa17.38■□□□□ 0.37
PDLIM2-203ENST00000339162 CDC42EP3Q9UKI2 254 aa17.38■□□□□ 0.37
PDLIM2-203ENST00000339162 TRBV19A0A075B6N1 114 aa17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 TRBV7-1A0A0A6YYK4 115 aa17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 TGOLN2O43493 480 aa17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 CD99P14209 185 aa17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 S100PP25815 95 aa17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 LY96Q9Y6Y9 160 aa17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 UNC79Q9P2D8 2635 aa17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 FLNAP21333 2647 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 ERVFC1-1P60608 527 aa17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 IL17RELQ6ZVW7 336 aa17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 RNASE7Q9H1E1 156 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-203ENST00000339162 TRBV24-1A0A075B6N3 115 aa17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 AP4M1O00189 453 aa17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 PF4V1P10720 104 aa17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 C1QL4Q86Z23 238 aa17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 C5orf17Q8NAS9 161 aa17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 ZFAND3Q9H8U3 227 aa17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 IGHV3-11P01762 117 aa17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 S100A9P06702 114 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 TCEAL7Q9BRU2 100 aa17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 ZMAT5Q9UDW3 170 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-203ENST00000339162 FAM223BA6NKX1 122 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 BMPR1BO00238 502 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 TRBV12-3P01733 135 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 FABP9Q0Z7S8 132 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 FAM223AQ8IWN6 122 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 OTORQ9NRC9 128 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 IGHV3OR16-13A0A075B7E8 117 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 IGHV3-74A0A0B4J1X5 117 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 IGHV3-66A0A0C4DH42 116 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 PPP1R2P9O14990 202 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 ZNF207O43670 478 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 TRGC2P03986 189 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 TCRAP04437 139 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 TAS2R60P59551 318 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 UBE2G1P62253 170 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 BAGE2Q86Y30 109 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 ATG101Q9BSB4 218 aa17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 GAR1Q9NY12 217 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-203ENST00000339162 S100A7AQ86SG5 101 aa17.34■□□□□ 0.37
PDLIM2-203ENST00000339162 OR8I2Q8N0Y5 310 aa17.34■□□□□ 0.37
PDLIM2-203ENST00000339162 SONP18583 2426 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-203ENST00000339162 HOXA3O43365 443 aaPredicted RBP17.33■□□□□ 0.37
PDLIM2-203ENST00000339162 Q6YL49 198 aa17.33■□□□□ 0.37
PDLIM2-203ENST00000339162 SIGLEC15Q6ZMC9 328 aa17.33■□□□□ 0.37
PDLIM2-203ENST00000339162 DUX5Q96PT3 197 aa17.33■□□□□ 0.37
PDLIM2-203ENST00000339162 IGHV3-49A0A0A0MS15 119 aa17.33■□□□□ 0.36
PDLIM2-203ENST00000339162 TRAV8-1A0A0A6YYK1 113 aa17.33■□□□□ 0.36
PDLIM2-203ENST00000339162 GCGP01275 180 aa17.33■□□□□ 0.36
PDLIM2-203ENST00000339162 SRP14P37108 136 aaKnown RBP17.33■□□□□ 0.36
PDLIM2-203ENST00000339162 CMTM2Q8TAZ6 248 aa17.33■□□□□ 0.36
PDLIM2-203ENST00000339162 CLPSL1A2RUU4 121 aa17.32■□□□□ 0.36
PDLIM2-203ENST00000339162 TMEM183BQ1AE95 376 aa17.32■□□□□ 0.36
PDLIM2-203ENST00000339162 KCNIP4Q6PIL6 250 aa17.32■□□□□ 0.36
PDLIM2-203ENST00000339162 C9orf139Q6ZV77 190 aa17.32■□□□□ 0.36
PDLIM2-203ENST00000339162 PYGO2Q9BRQ0 406 aa17.32■□□□□ 0.36
PDLIM2-203ENST00000339162 HECTD1Q9ULT8 2610 aa17.32■□□□□ 0.36
PDLIM2-203ENST00000339162 APOHP02749 345 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-203ENST00000339162 OR5R1Q8NH85 324 aa17.32■□□□□ 0.36
PDLIM2-203ENST00000339162 VPREB3Q9UKI3 123 aa17.32■□□□□ 0.36
PDLIM2-203ENST00000339162 M0R3E3 92 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms