RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 FAM24BQ8N5W8 94 aa11.71□□□□□ -0.53
MRPL55-202ENST00000336300 KIR2DL5BQ8NHK3 375 aa11.71□□□□□ -0.53
MRPL55-202ENST00000336300 PFDN5Q99471 154 aa11.71□□□□□ -0.53
MRPL55-202ENST00000336300 RSG1Q9BU20 258 aa11.71□□□□□ -0.53
MRPL55-202ENST00000336300 SLC25A32Q9H2D1 315 aa11.71□□□□□ -0.53
MRPL55-202ENST00000336300 DNAJC4Q9NNZ3 241 aa11.71□□□□□ -0.53
MRPL55-202ENST00000336300 KCNIP2Q9NS61 270 aa11.71□□□□□ -0.53
MRPL55-202ENST00000336300 HSPB11Q9Y547 144 aa11.71□□□□□ -0.53
MRPL55-202ENST00000336300 C17orf112F2Z3M2 114 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 IFNA5P01569 189 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 LYL1P12980 280 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 RPL35AP18077 110 aaKnown RBP11.7□□□□□ -0.54
MRPL55-202ENST00000336300 ATF4P18848 351 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-202ENST00000336300 MIC13Q5XKP0 118 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 SCGB1C1Q8TD33 95 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 C16orf92Q96LL3 132 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 UHRF2Q96PU4 802 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 ATP5SQ99766 215 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 SCRT1Q9BWW7 348 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 NPCDR1Q9BY65 106 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 SLC39A9Q9NUM3 307 aa11.7□□□□□ -0.54
MRPL55-202ENST00000336300 PSMB3P49720 205 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 PRR20EP86478 221 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 PRR20CP86479 221 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 PRR20DP86480 221 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 PRR20BP86481 221 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 PRR20AP86496 221 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 OPCMLQ14982 345 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 ZNF124Q15973 351 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 PATE2Q6UY27 113 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 LINC00052Q96N35 136 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 CSTL1Q9H114 145 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 PXMP4Q9Y6I8 212 aa11.69□□□□□ -0.54
MRPL55-202ENST00000336300 ISLRO14498 428 aa11.68□□□□□ -0.54
MRPL55-202ENST00000336300 BPIFA4PQ86YQ2 179 aa11.68□□□□□ -0.54
MRPL55-202ENST00000336300 INO80EQ8NBZ0 244 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-202ENST00000336300 LRRC20Q8TCA0 184 aa11.68□□□□□ -0.54
MRPL55-202ENST00000336300 TMEM37Q8WXS4 190 aa11.68□□□□□ -0.54
MRPL55-202ENST00000336300 WDR61Q9GZS3 305 aaKnown RBP11.68□□□□□ -0.54
MRPL55-202ENST00000336300 ACTL10Q5JWF8 245 aa11.67□□□□□ -0.54
MRPL55-202ENST00000336300 Q6ZWC4 215 aa11.67□□□□□ -0.54
MRPL55-202ENST00000336300 GATAD1Q8WUU5 269 aa11.67□□□□□ -0.54
MRPL55-202ENST00000336300 WWC2-AS2Q96NR7 200 aa11.67□□□□□ -0.54
MRPL55-202ENST00000336300 SMIM3Q9BZL3 60 aa11.67□□□□□ -0.54
MRPL55-202ENST00000336300 NUTF2P61970 127 aaKnown RBP11.66□□□□□ -0.54
MRPL55-202ENST00000336300 OR2T35Q8NGX2 323 aa11.66□□□□□ -0.54
MRPL55-202ENST00000336300 RPRMQ9NS64 109 aa11.66□□□□□ -0.54
MRPL55-202ENST00000336300 KNCNA6PVL3 124 aa11.65□□□□□ -0.54
MRPL55-202ENST00000336300 TMEM41BQ5BJD5 291 aa11.65□□□□□ -0.54
MRPL55-202ENST00000336300 SPATA31B1PQ5VZV4 182 aa11.65□□□□□ -0.54
MRPL55-202ENST00000336300 EBLN2Q6P2I7 272 aa11.65□□□□□ -0.54
MRPL55-202ENST00000336300 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-202ENST00000336300 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.54
MRPL55-202ENST00000336300 TP53TG1Q9Y2A0 90 aa11.65□□□□□ -0.54
MRPL55-202ENST00000336300 A0A087X0K7 114 aa11.64□□□□□ -0.55
MRPL55-202ENST00000336300 SOCS3O14543 225 aa11.64□□□□□ -0.55
MRPL55-202ENST00000336300 SPRY2O43597 315 aa11.64□□□□□ -0.55
MRPL55-202ENST00000336300 CA1P00915 261 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-202ENST00000336300 SPP1P10451 314 aa11.64□□□□□ -0.55
MRPL55-202ENST00000336300 ZNF266Q14584 549 aa11.64□□□□□ -0.55
MRPL55-202ENST00000336300 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
MRPL55-202ENST00000336300 PARD6GQ9BYG4 376 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-202ENST00000336300 RETNQ9HD89 108 aa11.64□□□□□ -0.55
MRPL55-202ENST00000336300 NBEAL2Q6ZNJ1 2754 aa11.64□□□□□ -0.55
MRPL55-202ENST00000336300 FXYD6-FXYD2A0A087WZ82 144 aa11.63□□□□□ -0.55
MRPL55-202ENST00000336300 CXCL2P19875 107 aa11.63□□□□□ -0.55
MRPL55-202ENST00000336300 DEFB135Q30KP9 77 aa11.63□□□□□ -0.55
MRPL55-202ENST00000336300 FAM78BQ5VT40 261 aa11.63□□□□□ -0.55
MRPL55-202ENST00000336300 LCN15Q6UWW0 184 aa11.63□□□□□ -0.55
MRPL55-202ENST00000336300 FOXI2Q6ZQN5 318 aa11.63□□□□□ -0.55
MRPL55-202ENST00000336300 TRPT1Q86TN4 253 aaKnown RBP11.63□□□□□ -0.55
MRPL55-202ENST00000336300 HUWE1Q7Z6Z7 4374 aaKnown RBP11.63□□□□□ -0.55
MRPL55-202ENST00000336300 HLA-DRB4P13762 266 aa11.62□□□□□ -0.55
MRPL55-202ENST00000336300 GUK1Q16774 197 aa11.62□□□□□ -0.55
MRPL55-202ENST00000336300 Q5BKY6 102 aa11.62□□□□□ -0.55
MRPL55-202ENST00000336300 RNF183Q96D59 192 aa11.62□□□□□ -0.55
MRPL55-202ENST00000336300 OVOL2Q9BRP0 275 aa11.62□□□□□ -0.55
MRPL55-202ENST00000336300 SAV1Q9H4B6 383 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-202ENST00000336300 HLA-DRB4X5D2U9 266 aa11.62□□□□□ -0.55
MRPL55-202ENST00000336300 H3BMM0 161 aa11.61□□□□□ -0.55
MRPL55-202ENST00000336300 FFAR4Q5NUL3 377 aa11.61□□□□□ -0.55
MRPL55-202ENST00000336300 SLC50A1Q9BRV3 221 aa11.61□□□□□ -0.55
MRPL55-202ENST00000336300 C1QTNF4Q9BXJ3 329 aa11.61□□□□□ -0.55
MRPL55-202ENST00000336300 MRPL32Q9BYC8 188 aaKnown RBP11.61□□□□□ -0.55
MRPL55-202ENST00000336300 HRH4Q9H3N8 390 aa11.61□□□□□ -0.55
MRPL55-202ENST00000336300 CLEC5AQ9NY25 188 aa11.61□□□□□ -0.55
MRPL55-202ENST00000336300 TRAV5A0A0B4J249 113 aa11.6□□□□□ -0.55
MRPL55-202ENST00000336300 MRPS12O15235 138 aaKnown RBP11.6□□□□□ -0.55
MRPL55-202ENST00000336300 MORN5Q5VZ52 161 aa11.6□□□□□ -0.55
MRPL55-202ENST00000336300 OR4B1Q8NGF8 309 aa11.6□□□□□ -0.55
MRPL55-202ENST00000336300 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
MRPL55-202ENST00000336300 WFDC1Q9HC57 220 aa11.6□□□□□ -0.55
MRPL55-202ENST00000336300 TNFSF18Q9UNG2 199 aa11.6□□□□□ -0.55
MRPL55-202ENST00000336300 DUSP14O95147 198 aaKnown RBP11.59□□□□□ -0.55
MRPL55-202ENST00000336300 RHOBP62745 196 aa11.59□□□□□ -0.55
MRPL55-202ENST00000336300 PSG3Q16557 428 aa11.59□□□□□ -0.55
MRPL55-202ENST00000336300 ACOT6Q3I5F7 207 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-202ENST00000336300 GCSAMLQ5JQS6 135 aa11.59□□□□□ -0.55
MRPL55-202ENST00000336300 ZNF738Q8NE65 137 aa11.59□□□□□ -0.55
MRPL55-202ENST00000336300 C20orf173Q96LM9 149 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms