RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 OR4F17Q8NGA8 305 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 WNK2Q9Y3S1 2297 aa13.99□□□□□ -0.17
LRCH3-201ENST00000334859 C19orf71A6NCJ1 209 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 NCBP2LA6PVI3 153 aaKnown RBP13.98□□□□□ -0.17
LRCH3-201ENST00000334859 ZNF705AQ6ZN79 300 aaPredicted RBP13.98□□□□□ -0.17
LRCH3-201ENST00000334859 CIARTQ8N365 385 aaPredicted RBP13.98□□□□□ -0.17
LRCH3-201ENST00000334859 GTSF1Q8WW33 167 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 PGLYRP4Q96LB8 373 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 PRSS22Q9GZN4 317 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 A0A1B0GXF2 115 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 GNG7O60262 68 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 RNF224P0DH78 156 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 COL8A1P27658 744 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 CT83Q5H943 113 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 C17orf77Q96MU5 243 aa13.98□□□□□ -0.17
LRCH3-201ENST00000334859 COL25A1Q9BXS0 654 aaPredicted RBP13.98□□□□□ -0.17
LRCH3-201ENST00000334859 NCOR2Q9Y618 2525 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 CSMD1Q96PZ7 3565 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 TRBV19A0A075B6N1 114 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 H3BRN7 92 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 HLA-DRB1P01911 266 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 PRB4P10163 310 aaPredicted RBP13.97□□□□□ -0.17
LRCH3-201ENST00000334859 VMO1Q7Z5L0 202 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 ZNF491Q8N8L2 437 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 ARPC1AQ92747 370 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 C20orf144Q9BQM9 153 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 SNHG12Q9BXW3 62 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 HSBP1O75506 76 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 OR2J3O76001 311 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 RNASEKQ6P5S7 137 aaKnown RBP13.97□□□□□ -0.17
LRCH3-201ENST00000334859 Q71RC1 249 aaPredicted RBP13.97□□□□□ -0.17
LRCH3-201ENST00000334859 NIT1Q86X76 327 aa13.97□□□□□ -0.17
LRCH3-201ENST00000334859 ALKBH7Q9BT30 221 aaPredicted RBP13.97□□□□□ -0.17
LRCH3-201ENST00000334859 CCDC144NLQ6NUI1 221 aa13.96□□□□□ -0.17
LRCH3-201ENST00000334859 Q8N976 141 aa13.96□□□□□ -0.17
LRCH3-201ENST00000334859 BORCS7Q96B45 105 aa13.96□□□□□ -0.17
LRCH3-201ENST00000334859 IGLV2-11P01706 119 aa13.95□□□□□ -0.18
LRCH3-201ENST00000334859 C3orf79P0CE67 100 aa13.95□□□□□ -0.18
LRCH3-201ENST00000334859 FCGR2BP31994 310 aaPredicted RBP13.95□□□□□ -0.18
LRCH3-201ENST00000334859 NDPQ00604 133 aa13.95□□□□□ -0.18
LRCH3-201ENST00000334859 RBPMS2Q6ZRY4 209 aaKnown RBP13.95□□□□□ -0.18
LRCH3-201ENST00000334859 DYNAPQ8N1N2 210 aa13.95□□□□□ -0.18
LRCH3-201ENST00000334859 KIR3DL3Q8N743 410 aa13.95□□□□□ -0.18
LRCH3-201ENST00000334859 M0R143 59 aa13.95□□□□□ -0.18
LRCH3-201ENST00000334859 IGLC2P0DOY2 106 aa13.95□□□□□ -0.18
LRCH3-201ENST00000334859 OR4B1Q8NGF8 309 aa13.95□□□□□ -0.18
LRCH3-201ENST00000334859 RNF24Q9Y225 148 aa13.95□□□□□ -0.18
LRCH3-201ENST00000334859 KLF5Q13887 457 aaPredicted RBP13.94□□□□□ -0.18
LRCH3-201ENST00000334859 Q56UQ5 140 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 ASCL2Q99929 193 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 MIEN1Q9BRT3 115 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 SOX21Q9Y651 276 aaPredicted RBP13.94□□□□□ -0.18
LRCH3-201ENST00000334859 IGLV11-55A0A075B6I3 123 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 NPIPB5A8MRT5 1133 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 ZNF562Q6V9R5 426 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 SIGLEC15Q6ZMC9 328 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 FANCD2OSQ96PS1 177 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 GFRA4Q9GZZ7 299 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 MED13LQ71F56 2210 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 HIVEP3Q5T1R4 2406 aa13.94□□□□□ -0.18
LRCH3-201ENST00000334859 K7EQM0 130 aa13.93□□□□□ -0.18
LRCH3-201ENST00000334859 M0R2Z0 102 aa13.93□□□□□ -0.18
LRCH3-201ENST00000334859 MFAP4P55083 255 aa13.93□□□□□ -0.18
LRCH3-201ENST00000334859 FOXA3P55318 350 aaPredicted RBP13.93□□□□□ -0.18
LRCH3-201ENST00000334859 NDUFS7O75251 213 aa13.93□□□□□ -0.18
LRCH3-201ENST00000334859 IGHV3-23P01764 117 aa13.93□□□□□ -0.18
LRCH3-201ENST00000334859 HOXB4P17483 251 aaPredicted RBP13.93□□□□□ -0.18
LRCH3-201ENST00000334859 ZFP36P26651 326 aaKnown RBP13.93□□□□□ -0.18
LRCH3-201ENST00000334859 DTX2Q86UW9 622 aa13.93□□□□□ -0.18
LRCH3-201ENST00000334859 BCL6BQ8N143 479 aaPredicted RBP13.93□□□□□ -0.18
LRCH3-201ENST00000334859 TRAV30A0A087WSZ9 112 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 WI2-2373I1.2A0A1W2PRP0 233 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 NPIPB6E9PJ23 425 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 RAB4AP20338 218 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 TMEM75Q8N9X5 138 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 ZC2HC1AQ96GY0 325 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 A0A1W2PPR1 153 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 CHEK1O14757 476 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 TMEM11P17152 192 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 C21orf62Q9NYP8 219 aa13.92□□□□□ -0.18
LRCH3-201ENST00000334859 M0R3E3 92 aa13.91□□□□□ -0.18
LRCH3-201ENST00000334859 NHLH1Q02575 133 aa13.91□□□□□ -0.18
LRCH3-201ENST00000334859 SPATA45Q537H7 98 aa13.91□□□□□ -0.18
LRCH3-201ENST00000334859 C1orf122Q6ZSJ8 110 aa13.91□□□□□ -0.18
LRCH3-201ENST00000334859 S100A7AQ86SG5 101 aa13.91□□□□□ -0.18
LRCH3-201ENST00000334859 ZNF414Q96IQ9 312 aa13.91□□□□□ -0.18
LRCH3-201ENST00000334859 UBTD1Q9HAC8 227 aa13.91□□□□□ -0.18
LRCH3-201ENST00000334859 FAM181BA6NEQ2 426 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 LYPD1Q8N2G4 141 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 PSG8Q9UQ74 426 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 FAM231BA6NCW3 169 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 MRPS12O15235 138 aaKnown RBP13.9□□□□□ -0.18
LRCH3-201ENST00000334859 SSTP61278 116 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 NUTF2P61970 127 aaKnown RBP13.9□□□□□ -0.18
LRCH3-201ENST00000334859 PSG3Q16557 428 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 MINOS1Q5TGZ0 78 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 TTC9CQ8N5M4 171 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 Q8N6K4 173 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 THYN1Q9P016 225 aa13.9□□□□□ -0.18
LRCH3-201ENST00000334859 MINOS1-NBL1R4GNA1 71 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms