RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 NPCDR1Q9BY65 106 aa12.23□□□□□ -0.45
TPM2-201ENST00000329305 KCNIP2Q9NS61 270 aa12.23□□□□□ -0.45
TPM2-201ENST00000329305 C17orf112F2Z3M2 114 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 IFNA5P01569 189 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 ATF4P18848 351 aaPredicted RBP12.22□□□□□ -0.45
TPM2-201ENST00000329305 PRR20EP86478 221 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 PRR20CP86479 221 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 PRR20DP86480 221 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 PRR20BP86481 221 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 PRR20AP86496 221 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 PSMG4Q5JS54 123 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 DNAJC4Q9NNZ3 241 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 SLC39A9Q9NUM3 307 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
TPM2-201ENST00000329305 KIR2DL5BA0A0G2JN68 375 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 KIR2DL5BA0A0G2JPC4 375 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 RPL35AP18077 110 aaKnown RBP12.21□□□□□ -0.45
TPM2-201ENST00000329305 ZNF124Q15973 351 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 PATE2Q6UY27 113 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 STHQ8IWL8 128 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 KIR2DL5AQ8N109 375 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 OR2T35Q8NGX2 323 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 KIR2DL5BQ8NHK3 375 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 RCHY1Q96PM5 261 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 RSG1Q9BU20 258 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 SMIM3Q9BZL3 60 aa12.21□□□□□ -0.45
TPM2-201ENST00000329305 WDR61Q9GZS3 305 aaKnown RBP12.21□□□□□ -0.45
TPM2-201ENST00000329305 PSMB3P49720 205 aa12.2□□□□□ -0.46
TPM2-201ENST00000329305 C16orf92Q96LL3 132 aa12.2□□□□□ -0.46
TPM2-201ENST00000329305 UBE2CO00762 179 aa12.19□□□□□ -0.46
TPM2-201ENST00000329305 ISLRO14498 428 aa12.19□□□□□ -0.46
TPM2-201ENST00000329305 BPIFA4PQ86YQ2 179 aa12.19□□□□□ -0.46
TPM2-201ENST00000329305 INO80EQ8NBZ0 244 aaPredicted RBP12.19□□□□□ -0.46
TPM2-201ENST00000329305 GATAD1Q8WUU5 269 aa12.19□□□□□ -0.46
TPM2-201ENST00000329305 TMEM37Q8WXS4 190 aa12.19□□□□□ -0.46
TPM2-201ENST00000329305 LINC00052Q96N35 136 aa12.19□□□□□ -0.46
TPM2-201ENST00000329305 DNAH9Q9NYC9 4486 aa12.18□□□□□ -0.46
TPM2-201ENST00000329305 FXYD6-FXYD2A0A087WZ82 144 aa12.18□□□□□ -0.46
TPM2-201ENST00000329305 ACTL10Q5JWF8 245 aa12.18□□□□□ -0.46
TPM2-201ENST00000329305 LRRC20Q8TCA0 184 aa12.18□□□□□ -0.46
TPM2-201ENST00000329305 AQP10Q96PS8 301 aa12.18□□□□□ -0.46
TPM2-201ENST00000329305 SOCS3O14543 225 aa12.17□□□□□ -0.46
TPM2-201ENST00000329305 ZNF266Q14584 549 aa12.17□□□□□ -0.46
TPM2-201ENST00000329305 Q5BKY6 102 aa12.17□□□□□ -0.46
TPM2-201ENST00000329305 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.17□□□□□ -0.46
TPM2-201ENST00000329305 PARD6GQ9BYG4 376 aaPredicted RBP12.17□□□□□ -0.46
TPM2-201ENST00000329305 CSTL1Q9H114 145 aa12.17□□□□□ -0.46
TPM2-201ENST00000329305 A0A087X0K7 114 aa12.16□□□□□ -0.46
TPM2-201ENST00000329305 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
TPM2-201ENST00000329305 Q6ZWC4 215 aa12.16□□□□□ -0.46
TPM2-201ENST00000329305 RPRMQ9NS64 109 aa12.16□□□□□ -0.46
TPM2-201ENST00000329305 TRPT1Q86TN4 253 aaKnown RBP12.15□□□□□ -0.46
TPM2-201ENST00000329305 RETNQ9HD89 108 aa12.15□□□□□ -0.46
TPM2-201ENST00000329305 CA1P00915 261 aaPredicted RBP12.14□□□□□ -0.47
TPM2-201ENST00000329305 SPP1P10451 314 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 CXCL2P19875 107 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
TPM2-201ENST00000329305 DEFB135Q30KP9 77 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 FAM78BQ5VT40 261 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 MORN5Q5VZ52 161 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 EBLN2Q6P2I7 272 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
TPM2-201ENST00000329305 LCN15Q6UWW0 184 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 FOXI2Q6ZQN5 318 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 WWC2-AS2Q96NR7 200 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 WFDC1Q9HC57 220 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 TNFSF18Q9UNG2 199 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
TPM2-201ENST00000329305 MRPS12O15235 138 aaKnown RBP12.13□□□□□ -0.47
TPM2-201ENST00000329305 HLA-DRB4P13762 266 aa12.13□□□□□ -0.47
TPM2-201ENST00000329305 TMEM41BQ5BJD5 291 aa12.13□□□□□ -0.47
TPM2-201ENST00000329305 GCSAMLQ5JQS6 135 aa12.13□□□□□ -0.47
TPM2-201ENST00000329305 FFAR4Q5NUL3 377 aa12.13□□□□□ -0.47
TPM2-201ENST00000329305 SPATA31B1PQ5VZV4 182 aa12.13□□□□□ -0.47
TPM2-201ENST00000329305 C17orf77Q96MU5 243 aa12.13□□□□□ -0.47
TPM2-201ENST00000329305 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
TPM2-201ENST00000329305 MRPL32Q9BYC8 188 aaKnown RBP12.13□□□□□ -0.47
TPM2-201ENST00000329305 SAV1Q9H4B6 383 aaPredicted RBP12.13□□□□□ -0.47
TPM2-201ENST00000329305 HLA-DRB4X5D2U9 266 aa12.13□□□□□ -0.47
TPM2-201ENST00000329305 TGP01266 2768 aa12.12□□□□□ -0.47
TPM2-201ENST00000329305 TRAV5A0A0B4J249 113 aa12.12□□□□□ -0.47
TPM2-201ENST00000329305 SPRY2O43597 315 aa12.12□□□□□ -0.47
TPM2-201ENST00000329305 GUK1Q16774 197 aa12.12□□□□□ -0.47
TPM2-201ENST00000329305 OVOL2Q9BRP0 275 aa12.12□□□□□ -0.47
TPM2-201ENST00000329305 HRH4Q9H3N8 390 aa12.12□□□□□ -0.47
TPM2-201ENST00000329305 TIMM9Q9Y5J7 89 aa12.12□□□□□ -0.47
TPM2-201ENST00000329305 BORCS7-ASMTA0A0B4J1R7 106 aa12.11□□□□□ -0.47
TPM2-201ENST00000329305 RNF222A6NCQ9 220 aa12.11□□□□□ -0.47
TPM2-201ENST00000329305 H3BMM0 161 aa12.11□□□□□ -0.47
TPM2-201ENST00000329305 ARPC5O15511 151 aa12.11□□□□□ -0.47
TPM2-201ENST00000329305 RNF182Q8N6D2 247 aa12.11□□□□□ -0.47
TPM2-201ENST00000329305 ZNF738Q8NE65 137 aa12.11□□□□□ -0.47
TPM2-201ENST00000329305 RNF183Q96D59 192 aa12.11□□□□□ -0.47
TPM2-201ENST00000329305 TMEM14CQ9P0S9 112 aa12.11□□□□□ -0.47
TPM2-201ENST00000329305 FUT9Q9Y231 359 aa12.11□□□□□ -0.47
TPM2-201ENST00000329305 HUWE1Q7Z6Z7 4374 aaKnown RBP12.1□□□□□ -0.47
TPM2-201ENST00000329305 TRAV8-2A0A0B4J237 113 aa12.1□□□□□ -0.47
TPM2-201ENST00000329305 G3V3Q6 166 aa12.1□□□□□ -0.47
TPM2-201ENST00000329305 SNRPCP09234 159 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms