RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SORL1Q92673 2214 aa13.42□□□□□ -0.26
SSSCA1-201ENST00000309328 DEFA6Q01524 100 aa13.42□□□□□ -0.26
SSSCA1-201ENST00000309328 ACOT6Q3I5F7 207 aaPredicted RBP13.42□□□□□ -0.26
SSSCA1-201ENST00000309328 PATE2Q6UY27 113 aa13.42□□□□□ -0.26
SSSCA1-201ENST00000309328 BPIFA4PQ86YQ2 179 aa13.42□□□□□ -0.26
SSSCA1-201ENST00000309328 STXBP6Q8NFX7 210 aa13.42□□□□□ -0.26
SSSCA1-201ENST00000309328 UHRF2Q96PU4 802 aa13.42□□□□□ -0.26
SSSCA1-201ENST00000309328 RSG1Q9BU20 258 aa13.42□□□□□ -0.26
SSSCA1-201ENST00000309328 SCRT1Q9BWW7 348 aa13.42□□□□□ -0.26
SSSCA1-201ENST00000309328 A0A1B0GVG6 124 aa13.41□□□□□ -0.26
SSSCA1-201ENST00000309328 PFDN1O60925 122 aa13.41□□□□□ -0.26
SSSCA1-201ENST00000309328 SNRPD3P62318 126 aaKnown RBP13.41□□□□□ -0.26
SSSCA1-201ENST00000309328 FFAR4Q5NUL3 377 aa13.41□□□□□ -0.26
SSSCA1-201ENST00000309328 SMAD5-AS1Q9Y6J3 95 aa13.41□□□□□ -0.26
SSSCA1-201ENST00000309328 MEGF8Q7Z7M0 2845 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 BCL2L11O43521 198 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 ATF4P18848 351 aaPredicted RBP13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 CXCL2P19875 107 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 M6PRP20645 277 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 ATP6V0CP27449 155 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 ID1P41134 155 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 RHOBP62745 196 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 ZFP69Q49AA0 526 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 RPL7L1Q6DKI1 246 aaKnown RBP13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 HSD17B11Q8NBQ5 300 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 DCANP1Q8TF63 244 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 SLC25A32Q9H2D1 315 aa13.4□□□□□ -0.26
SSSCA1-201ENST00000309328 IGKV3-7A0A075B6H7 116 aa13.39□□□□□ -0.27
SSSCA1-201ENST00000309328 A0A087X0K7 114 aa13.39□□□□□ -0.27
SSSCA1-201ENST00000309328 A8MZ25 164 aa13.39□□□□□ -0.27
SSSCA1-201ENST00000309328 OR11H12B2RN74 326 aa13.39□□□□□ -0.27
SSSCA1-201ENST00000309328 K7EQG2 157 aa13.39□□□□□ -0.27
SSSCA1-201ENST00000309328 TAS2R45P59539 299 aa13.39□□□□□ -0.27
SSSCA1-201ENST00000309328 GUK1Q16774 197 aa13.39□□□□□ -0.27
SSSCA1-201ENST00000309328 FAM78BQ5VT40 261 aa13.39□□□□□ -0.27
SSSCA1-201ENST00000309328 ISLRO14498 428 aa13.38□□□□□ -0.27
SSSCA1-201ENST00000309328 PSMB3P49720 205 aa13.38□□□□□ -0.27
SSSCA1-201ENST00000309328 TMUB2Q71RG4 321 aa13.38□□□□□ -0.27
SSSCA1-201ENST00000309328 Q8N1Y9 231 aa13.38□□□□□ -0.27
SSSCA1-201ENST00000309328 GBGT1Q8N5D6 347 aa13.38□□□□□ -0.27
SSSCA1-201ENST00000309328 MRAPQ8TCY5 172 aa13.38□□□□□ -0.27
SSSCA1-201ENST00000309328 TMEM14CQ9P0S9 112 aa13.38□□□□□ -0.27
SSSCA1-201ENST00000309328 FUT9Q9Y231 359 aa13.38□□□□□ -0.27
SSSCA1-201ENST00000309328 K7EIL1 84 aa13.37□□□□□ -0.27
SSSCA1-201ENST00000309328 TFPI2P48307 235 aa13.37□□□□□ -0.27
SSSCA1-201ENST00000309328 LEMD1Q68G75 181 aa13.37□□□□□ -0.27
SSSCA1-201ENST00000309328 LCN15Q6UWW0 184 aa13.37□□□□□ -0.27
SSSCA1-201ENST00000309328 HRH4Q9H3N8 390 aa13.37□□□□□ -0.27
SSSCA1-201ENST00000309328 CYTL1Q9NRR1 136 aa13.37□□□□□ -0.27
SSSCA1-201ENST00000309328 CLEC5AQ9NY25 188 aa13.37□□□□□ -0.27
SSSCA1-201ENST00000309328 SELENOKQ9Y6D0 94 aa13.37□□□□□ -0.27
SSSCA1-201ENST00000309328 A0A1W2PPV4 95 aa13.36□□□□□ -0.27
SSSCA1-201ENST00000309328 CD7P09564 240 aa13.36□□□□□ -0.27
SSSCA1-201ENST00000309328 KHDC3LQ587J8 217 aa13.36□□□□□ -0.27
SSSCA1-201ENST00000309328 EIF5AL1Q6IS14 154 aaKnown RBP13.36□□□□□ -0.27
SSSCA1-201ENST00000309328 WFDC3Q8IUB2 231 aa13.36□□□□□ -0.27
SSSCA1-201ENST00000309328 ZNF471Q9BX82 626 aaPredicted RBP13.36□□□□□ -0.27
SSSCA1-201ENST00000309328 TUBA4BQ9H853 241 aa13.36□□□□□ -0.27
SSSCA1-201ENST00000309328 ZNF253O75346 499 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 PRB2P02812 416 aaPredicted RBP13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 TPT1P13693 172 aaKnown RBP13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 PDE6HQ13956 83 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 ODF3L2Q3SX64 289 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 GCSAMLQ5JQS6 135 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 OR10G4Q8NGN3 311 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 OR10G9Q8NGN4 311 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 OR10G7Q8NGN6 311 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 STOML3Q8TAV4 291 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 SLC50A1Q9BRV3 221 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 C19orf73Q9NVV2 129 aa13.35□□□□□ -0.27
SSSCA1-201ENST00000309328 MRPS12O15235 138 aaKnown RBP13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 SEC11BP0C7V7 166 aa13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 SPP1P10451 314 aa13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 LGALSLQ3ZCW2 172 aaPredicted RBP13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 TMEM41BQ5BJD5 291 aa13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 DEFB121Q5J5C9 76 aa13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 AKR1C8PQ5T2L2 129 aa13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 LRRC20Q8TCA0 184 aa13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 C16orf92Q96LL3 132 aa13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 MAP6D1Q9H9H5 199 aa13.34□□□□□ -0.27
SSSCA1-201ENST00000309328 UMAD1C9J7I0 102 aa13.33□□□□□ -0.28
SSSCA1-201ENST00000309328 SOCS3O14543 225 aa13.33□□□□□ -0.28
SSSCA1-201ENST00000309328 IGLC2P0DOY2 106 aa13.33□□□□□ -0.28
SSSCA1-201ENST00000309328 IGHV4-30-4P0DP06 118 aa13.33□□□□□ -0.28
SSSCA1-201ENST00000309328 HIST1H1EP10412 219 aaKnown RBP13.33□□□□□ -0.28
SSSCA1-201ENST00000309328 SPATA31B1PQ5VZV4 182 aa13.33□□□□□ -0.28
SSSCA1-201ENST00000309328 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.33□□□□□ -0.28
SSSCA1-201ENST00000309328 PQLC2Q6ZP29 291 aa13.33□□□□□ -0.28
SSSCA1-201ENST00000309328 BAP18Q8IXM2 172 aa13.33□□□□□ -0.28
SSSCA1-201ENST00000309328 ZNF688P0C7X2 276 aa13.32□□□□□ -0.28
SSSCA1-201ENST00000309328 CDC34P49427 236 aaPredicted RBP13.32□□□□□ -0.28
SSSCA1-201ENST00000309328 MORN5Q5VZ52 161 aa13.32□□□□□ -0.28
SSSCA1-201ENST00000309328 MIR17HGQ75NE6 70 aa13.32□□□□□ -0.28
SSSCA1-201ENST00000309328 SLC51BQ86UW2 128 aa13.32□□□□□ -0.28
SSSCA1-201ENST00000309328 ACTR3CQ9C0K3 210 aaPredicted RBP13.32□□□□□ -0.28
SSSCA1-201ENST00000309328 SH3BGRL3Q9H299 93 aa13.32□□□□□ -0.28
SSSCA1-201ENST00000309328 SRD5A3Q9H8P0 318 aa13.32□□□□□ -0.28
SSSCA1-201ENST00000309328 OR7C2O60412 319 aa13.31□□□□□ -0.28
SSSCA1-201ENST00000309328 DEFB131AP59861 70 aa13.31□□□□□ -0.28
SSSCA1-201ENST00000309328 RAB2AP61019 212 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms