RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 C18orf32Q8TCD1 76 aa10.78□□□□□ -0.68
CDH8-201ENST00000299345 TMEM14CQ9P0S9 112 aa10.78□□□□□ -0.68
CDH8-201ENST00000299345 FOXA3P55318 350 aaPredicted RBP10.78□□□□□ -0.68
CDH8-201ENST00000299345 WIPF2Q8TF74 440 aaPredicted RBP10.78□□□□□ -0.68
CDH8-201ENST00000299345 C21orf62Q9NYP8 219 aa10.78□□□□□ -0.68
CDH8-201ENST00000299345 C1RLQ9NZP8 487 aa10.78□□□□□ -0.68
CDH8-201ENST00000299345 NCOR2Q9Y618 2525 aa10.78□□□□□ -0.68
CDH8-201ENST00000299345 IGHV3-23P01764 117 aa10.78□□□□□ -0.68
CDH8-201ENST00000299345 PAX2Q02962 417 aa10.78□□□□□ -0.68
CDH8-201ENST00000299345 FAM162BQ5T6X4 162 aa10.78□□□□□ -0.68
CDH8-201ENST00000299345 RBPMS2Q6ZRY4 209 aaKnown RBP10.78□□□□□ -0.68
CDH8-201ENST00000299345 TMUB1Q9BVT8 246 aa10.78□□□□□ -0.68
CDH8-201ENST00000299345 OR2J3O76001 311 aa10.77□□□□□ -0.69
CDH8-201ENST00000299345 LTAP01374 205 aa10.77□□□□□ -0.69
CDH8-201ENST00000299345 SSTP61278 116 aa10.77□□□□□ -0.69
CDH8-201ENST00000299345 LY6DQ14210 128 aa10.77□□□□□ -0.69
CDH8-201ENST00000299345 ZNF562Q6V9R5 426 aa10.77□□□□□ -0.69
CDH8-201ENST00000299345 Q86TA4 180 aa10.77□□□□□ -0.69
CDH8-201ENST00000299345 TIMM8BQ9Y5J9 83 aaPredicted RBP10.77□□□□□ -0.69
CDH8-201ENST00000299345 OR4B1Q8NGF8 309 aa10.77□□□□□ -0.69
CDH8-201ENST00000299345 MRPL27Q9P0M9 148 aaKnown RBP10.77□□□□□ -0.69
CDH8-201ENST00000299345 ZNF491Q8N8L2 437 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 ZNF492Q9P255 531 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 SOX21Q9Y651 276 aaPredicted RBP10.76□□□□□ -0.69
CDH8-201ENST00000299345 TRBV19A0A075B6N1 114 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 FAM106CPP0CH98 169 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 NPBQ8NG41 125 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 CFHR4Q92496 578 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 C17orf77Q96MU5 243 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 TXN2Q99757 166 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 C2orf88Q9BSF0 95 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 MLST8Q9BVC4 326 aa10.76□□□□□ -0.69
CDH8-201ENST00000299345 NDUFS7O75251 213 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 LINC00322Q6ZN03 302 aaPredicted RBP10.75□□□□□ -0.69
CDH8-201ENST00000299345 KIR2DL5BA0A0G2JN68 375 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 KIR2DL5BA0A0G2JPC4 375 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 A6NNC1 897 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 RNF224P0DH78 156 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 CT83Q5H943 113 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 TEX43Q6ZNM6 134 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 KIR2DL5AQ8N109 375 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 PSG8Q9UQ74 426 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 IGHV3-35A0A0C4DH35 117 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 H3BRN7 92 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 NDUFA3O95167 84 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 C3orf79P0CE67 100 aa10.75□□□□□ -0.69
CDH8-201ENST00000299345 OOSP1A8MZH6 123 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 M0R3E3 92 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 EREGO14944 169 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 S100A7P31151 101 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 NHLH1Q02575 133 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 ECSCRQ19T08 205 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 MINOS1Q5TGZ0 78 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 GDF5OSQ5U4N7 250 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 MIEN1Q9BRT3 115 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 ALKBH7Q9BT30 221 aaPredicted RBP10.74□□□□□ -0.69
CDH8-201ENST00000299345 ZFP30Q9Y2G7 519 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 MINOS1-NBL1R4GNA1 71 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 CHD8Q9HCK8 2581 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 OR2T8A6NH00 312 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 SPATA45Q537H7 98 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 ASCL2Q99929 193 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 LPAR2Q9HBW0 351 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 RIGQ13278 110 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 C20orf144Q9BQM9 153 aa10.74□□□□□ -0.69
CDH8-201ENST00000299345 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.73□□□□□ -0.69
CDH8-201ENST00000299345 PAX1P15863 534 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 RPL7P18124 248 aaKnown RBP10.73□□□□□ -0.69
CDH8-201ENST00000299345 C11orf71Q6IPW1 123 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 ATOH7Q8N100 152 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 LYPD1Q8N2G4 141 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 KLHDC1Q8N7A1 406 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 ODF3BA8MYP8 253 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 UNQ5815/PRO19632Q6UWF5 114 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 C1orf122Q6ZSJ8 110 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 C7orf69Q9H7B7 122 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 IGHV3OR16-8A0A075B7F1 116 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 NPIPB5A8MRT5 1133 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 GTSF1Q8WW33 167 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
CDH8-201ENST00000299345 TMSB15BA0A087X1C1 80 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 NDUFB8O95169 186 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 CSN3P07498 182 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 NIT1Q86X76 327 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 SNHG12Q9BXW3 62 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 PRSS22Q9GZN4 317 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 A0A1B0GUT8 65 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 C19orf71A6NCJ1 209 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 RABAC1Q9UI14 185 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 IGLV11-55A0A075B6I3 123 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 SFTPCP11686 197 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 ZFP36P26651 326 aaKnown RBP10.72□□□□□ -0.69
CDH8-201ENST00000299345 FANCD2OSQ96PS1 177 aa10.72□□□□□ -0.69
CDH8-201ENST00000299345 FAM231BA6NCW3 169 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 ZNF785A8K8V0 405 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 M0QZK8 103 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 TCAPO15273 167 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 EFNA4P52798 201 aa10.71□□□□□ -0.69
CDH8-201ENST00000299345 PSG9Q00887 426 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms