RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 CTSGP08311 255 aa12.25□□□□□ -0.45
NPM1-201ENST00000296930 M6PRP20645 277 aa12.25□□□□□ -0.45
NPM1-201ENST00000296930 ADMP35318 185 aa12.25□□□□□ -0.45
NPM1-201ENST00000296930 RPP25LQ8N5L8 163 aaKnown RBP12.25□□□□□ -0.45
NPM1-201ENST00000296930 FAM213BQ8TBF2 198 aa12.25□□□□□ -0.45
NPM1-201ENST00000296930 LRRC20Q8TCA0 184 aa12.25□□□□□ -0.45
NPM1-201ENST00000296930 ATP6V0BQ99437 205 aa12.25□□□□□ -0.45
NPM1-201ENST00000296930 CHRDL1Q9BU40 450 aa12.25□□□□□ -0.45
NPM1-201ENST00000296930 RETNQ9HD89 108 aa12.25□□□□□ -0.45
NPM1-201ENST00000296930 SELENOKQ9Y6D0 94 aa12.25□□□□□ -0.45
NPM1-201ENST00000296930 DYNC2H1Q8NCM8 4307 aaKnown RBP12.24□□□□□ -0.45
NPM1-201ENST00000296930 IGHV3-35A0A0C4DH35 117 aa12.24□□□□□ -0.45
NPM1-201ENST00000296930 MBP02144 154 aa12.24□□□□□ -0.45
NPM1-201ENST00000296930 PSG1P11464 419 aa12.24□□□□□ -0.45
NPM1-201ENST00000296930 RAB14P61106 215 aa12.24□□□□□ -0.45
NPM1-201ENST00000296930 ZNF726P1Q15940 193 aa12.24□□□□□ -0.45
NPM1-201ENST00000296930 ACOT6Q3I5F7 207 aaPredicted RBP12.24□□□□□ -0.45
NPM1-201ENST00000296930 Q6ZRG5 221 aa12.24□□□□□ -0.45
NPM1-201ENST00000296930 SAT2Q96F10 170 aaPredicted RBP12.24□□□□□ -0.45
NPM1-201ENST00000296930 ZNF414Q96IQ9 312 aa12.24□□□□□ -0.45
NPM1-201ENST00000296930 YPEL3P61236 119 aaPredicted RBP12.23□□□□□ -0.45
NPM1-201ENST00000296930 SPSB3Q6PJ21 355 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 DPPA3Q6W0C5 159 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 RBPMS2Q6ZRY4 209 aaKnown RBP12.23□□□□□ -0.45
NPM1-201ENST00000296930 SSX7Q7RTT5 188 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 OR10G4Q8NGN3 311 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 OR10G9Q8NGN4 311 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 OR10G7Q8NGN6 311 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 GAR1Q9NY12 217 aaKnown RBP12.23□□□□□ -0.45
NPM1-201ENST00000296930 LCE6AA0A183 80 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 TOMM40O96008 361 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 PXDC1Q5TGL8 231 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 IL17DQ8TAD2 202 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 TMEM190Q8WZ59 177 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 FAM110AQ9BQ89 295 aa12.23□□□□□ -0.45
NPM1-201ENST00000296930 NUPL2O15504 423 aaKnown RBP12.22□□□□□ -0.45
NPM1-201ENST00000296930 RD3LP0DJH9 198 aa12.22□□□□□ -0.45
NPM1-201ENST00000296930 TMEM37Q8WXS4 190 aa12.22□□□□□ -0.45
NPM1-201ENST00000296930 EIF3GO75821 320 aaKnown RBP eCLIP12.21□□□□□ -0.45
NPM1-201ENST00000296930 FABP1P07148 127 aa12.21□□□□□ -0.45
NPM1-201ENST00000296930 PLP1P60201 277 aa12.21□□□□□ -0.45
NPM1-201ENST00000296930 BLOC1S1P78537 153 aa12.21□□□□□ -0.45
NPM1-201ENST00000296930 FAM122CQ6P4D5 195 aa12.21□□□□□ -0.45
NPM1-201ENST00000296930 PATE2Q6UY27 113 aa12.21□□□□□ -0.45
NPM1-201ENST00000296930 OR51G1Q8NGK1 321 aa12.21□□□□□ -0.45
NPM1-201ENST00000296930 SLC25A22Q9H936 323 aa12.21□□□□□ -0.45
NPM1-201ENST00000296930 DAZ1Q9NQZ3 744 aaKnown RBP12.21□□□□□ -0.45
NPM1-201ENST00000296930 DOK5Q9P104 306 aa12.21□□□□□ -0.45
NPM1-201ENST00000296930 STARD9Q9P2P6 4700 aa12.21□□□□□ -0.45
NPM1-201ENST00000296930 NDUFA4O00483 81 aa12.2□□□□□ -0.46
NPM1-201ENST00000296930 SCGB2A1O75556 95 aa12.2□□□□□ -0.46
NPM1-201ENST00000296930 LYPD6BQ8NI32 183 aa12.2□□□□□ -0.46
NPM1-201ENST00000296930 SEPSECSQ9HD40 501 aaKnown RBP12.2□□□□□ -0.46
NPM1-201ENST00000296930 OR5G3P0C626 314 aa12.2□□□□□ -0.46
NPM1-201ENST00000296930 CDC34P49427 236 aaPredicted RBP12.2□□□□□ -0.46
NPM1-201ENST00000296930 GATAD1Q8WUU5 269 aa12.2□□□□□ -0.46
NPM1-201ENST00000296930 RAB24Q969Q5 203 aa12.2□□□□□ -0.46
NPM1-201ENST00000296930 SPAG8Q99932 426 aaPredicted RBP12.2□□□□□ -0.46
NPM1-201ENST00000296930 ACTR3CQ9C0K3 210 aaPredicted RBP12.2□□□□□ -0.46
NPM1-201ENST00000296930 RYR2Q92736 4967 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 LOC102724200A0A096LPH7 203 aaPredicted RBP12.19□□□□□ -0.46
NPM1-201ENST00000296930 CTXND1A0A1B0GTU2 59 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 COX7A2P2O60397 106 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 IL4P05112 153 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 ORM2P19652 201 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 LYZP61626 148 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 SPATA31B1PQ5VZV4 182 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 ZNF600Q6ZNG1 722 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 OR1B1Q8NGR6 318 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 Q8WTZ3 238 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 MBD3L1Q8WWY6 194 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 RNF125Q96EQ8 232 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 PFDN5Q99471 154 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 DNAJC4Q9NNZ3 241 aa12.19□□□□□ -0.46
NPM1-201ENST00000296930 PUS1Q9Y606 427 aaKnown RBP eCLIP12.19□□□□□ -0.46
NPM1-201ENST00000296930 K7EMT4 169 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 TSPAN4O14817 238 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 HMGB3O15347 200 aaKnown RBP12.18□□□□□ -0.46
NPM1-201ENST00000296930 RHOBP62745 196 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 FAM78BQ5VT40 261 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 MORN5Q5VZ52 161 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 SFT2D1Q8WV19 159 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 UHRF2Q96PU4 802 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 HRH4Q9H3N8 390 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 ELOA3CA0A087WX78 387 aaPredicted RBP12.18□□□□□ -0.46
NPM1-201ENST00000296930 A0A1W2PPV4 95 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 MAP1LC3B2A6NCE7 125 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 TEX46H3BTG2 121 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 HYPMO75409 117 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 USF2Q15853 346 aaPredicted RBP12.18□□□□□ -0.46
NPM1-201ENST00000296930 C10orf113Q5VZT2 155 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 LCN15Q6UWW0 184 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 MIR17HGQ75NE6 70 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 LYSTQ99698 3801 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 C20orf24Q9BUV8 137 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 PBDC1Q9BVG4 233 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 MAP1LC3BQ9GZQ8 125 aa12.18□□□□□ -0.46
NPM1-201ENST00000296930 ZFAND3Q9H8U3 227 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms