RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 CD28P10747 220 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 FXYD7P58549 80 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 TRAV9-2A0A087WT02 112 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 FNDC10F2Z333 226 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 SCGB1A1P11684 91 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 CFAP161Q6P656 301 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 PLXND1Q9Y4D7 1925 aa13.94□□□□□ -0.18
CDCP1-201ENST00000296129 NUP35Q8NFH5 326 aa13.94□□□□□ -0.18
CDCP1-201ENST00000296129 SRRM4A7MD48 611 aaKnown RBP13.94□□□□□ -0.18
CDCP1-201ENST00000296129 CACNA1DQ01668 2161 aa13.94□□□□□ -0.18
CDCP1-201ENST00000296129 TRAV12-3A0A0B4J271 114 aa13.94□□□□□ -0.18
CDCP1-201ENST00000296129 IGHV3-73A0A0B4J1V6 119 aa13.94□□□□□ -0.18
CDCP1-201ENST00000296129 ACTL10Q5JWF8 245 aa13.94□□□□□ -0.18
CDCP1-201ENST00000296129 SP5Q6BEB4 398 aaPredicted RBP13.94□□□□□ -0.18
CDCP1-201ENST00000296129 ZNF833PQ6ZTB9 187 aa13.94□□□□□ -0.18
CDCP1-201ENST00000296129 PIP4P1Q86T03 277 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 SRSF8Q9BRL6 282 aaKnown RBP13.93□□□□□ -0.18
CDCP1-201ENST00000296129 LIME1Q9H400 295 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 TMEM14BQ9NUH8 114 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 FAM215AQ9Y5M1 114 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 IGKCP01834 107 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 RCHY1Q96PM5 261 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 LY96Q9Y6Y9 160 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 LAMTOR2Q9Y2Q5 125 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 LINC00587B1AMM8 73 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 RNF223E7ERA6 249 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 IGLV1-44P01699 117 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 ERVK11-1P61568 191 aa13.93□□□□□ -0.18
CDCP1-201ENST00000296129 CNOT1A5YKK6 2376 aaKnown RBP13.92□□□□□ -0.18
CDCP1-201ENST00000296129 A6NNC1 897 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 MALP21145 153 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 LAGE3Q14657 143 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 IFI27L1Q96BM0 104 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 NDUFS8O00217 210 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 KLHL30-AS1Q8NEE0 82 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 DEFB104AQ8WTQ1 72 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 AMBPP02760 352 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 UBE2E1P51965 193 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 PRSS33Q8NF86 280 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 SSC4DQ8WTU2 575 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 NCOR1O75376 2440 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 GVINP1Q7Z2Y8 2422 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 MSMBP08118 114 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 LCNL1Q6ZST4 164 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 LYPD1Q8N2G4 141 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 RHPN1-AS1Q9BWJ2 59 aa13.92□□□□□ -0.18
CDCP1-201ENST00000296129 CEP250Q9BV73 2442 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 FER1L5A0AVI2 2057 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 ATP6V0E1O15342 81 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 ADCYAP1P18509 176 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 RASL11AQ6T310 242 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 SHANK2-AS3Q9BTD1 123 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 MAPK1IP1LQ8NDC0 245 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 ERCC8Q13216 396 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 LINC00477Q96M19 166 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 DOCK8Q8NF50 2099 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 LOXP28300 417 aaPredicted RBP13.91□□□□□ -0.18
CDCP1-201ENST00000296129 NDUFA4L2Q9NRX3 87 aa13.91□□□□□ -0.18
CDCP1-201ENST00000296129 SPCS1Q9Y6A9 102 aa13.9□□□□□ -0.18
CDCP1-201ENST00000296129 FAM90A2PQ658T7 463 aa13.9□□□□□ -0.18
CDCP1-201ENST00000296129 Q86TA4 180 aa13.9□□□□□ -0.18
CDCP1-201ENST00000296129 MST1LQ2TV78 715 aa13.9□□□□□ -0.18
CDCP1-201ENST00000296129 TEX36Q5VZQ5 186 aa13.9□□□□□ -0.18
CDCP1-201ENST00000296129 ZNF562Q6V9R5 426 aa13.9□□□□□ -0.18
CDCP1-201ENST00000296129 TMEM8BA6NDV4 472 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.89□□□□□ -0.19
CDCP1-201ENST00000296129 IGKV1-39P01597 117 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 IGKV1D-39P04432 117 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 LINC00479Q96M42 142 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 IGHV3-64A0A075B6Q5 118 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 OVOL3O00110 214 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 RPL35AP18077 110 aaKnown RBP13.89□□□□□ -0.19
CDCP1-201ENST00000296129 PAX9P55771 341 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 TMEM249Q2WGJ8 235 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 NDUFAF3Q9BU61 184 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 ZNF318Q5VUA4 2279 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 TYMSP04818 313 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 CMC4P56277 68 aaPredicted RBP13.89□□□□□ -0.19
CDCP1-201ENST00000296129 LRRK1Q38SD2 2015 aa13.89□□□□□ -0.19
CDCP1-201ENST00000296129 IGHV2-70DA0A0C4DH43 119 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 H3BUT2 72 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 DMRTC2Q8IXT2 367 aaPredicted RBP13.88□□□□□ -0.19
CDCP1-201ENST00000296129 FAM110DQ8TAY7 271 aaPredicted RBP13.88□□□□□ -0.19
CDCP1-201ENST00000296129 NHP2Q9NX24 153 aaKnown RBP13.88□□□□□ -0.19
CDCP1-201ENST00000296129 TRBV7-9A0A0J9YWB2 115 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 C15orf65H3BRN8 121 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 IGLV3-1P01715 115 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 NBL1P41271 181 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 NCOR1P1Q9H4R4 102 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 CHCHD5Q9BSY4 110 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 A0A1B0GWB2 263 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 TMEM256Q8N2U0 113 aa13.88□□□□□ -0.19
CDCP1-201ENST00000296129 DAZ1Q9NQZ3 744 aaKnown RBP13.88□□□□□ -0.19
CDCP1-201ENST00000296129 IGHV1-69DA0A0B4J2H0 117 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 ADARB2-AS1A8MUL3 147 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 IGHV1-69P01742 117 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 HEATR1Q9H583 2144 aaKnown RBP13.87□□□□□ -0.19
CDCP1-201ENST00000296129 ZNF815PA8K554 130 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 NDUFB8O95169 186 aa13.87□□□□□ -0.19
CDCP1-201ENST00000296129 Q5PR19 223 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms