RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RPL7P18124 248 aaKnown RBP4.85□□□□□ -1.63
CD44-204ENST00000279452 MEOX2P50222 304 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 OPCMLQ14982 345 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 VWC2Q2TAL6 325 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 DEFB135Q30KP9 77 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 ACTL10Q5JWF8 245 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 PXDC1Q5TGL8 231 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 OR2T35Q8NGX2 323 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 DCANP1Q8TF63 244 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 GPR82Q96P67 336 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 PFDN5Q99471 154 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 RSG1Q9BU20 258 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 RNF126Q9BV68 326 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 NPCDR1Q9BY65 106 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 KCNIP2Q9NS61 270 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 SLC39A9Q9NUM3 307 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 RNF24Q9Y225 148 aa4.85□□□□□ -1.63
CD44-204ENST00000279452 ELOA3CA0A087WX78 387 aaPredicted RBP4.84□□□□□ -1.63
CD44-204ENST00000279452 MPDU1O75352 247 aa4.84□□□□□ -1.63
CD44-204ENST00000279452 CA1P00915 261 aaPredicted RBP4.84□□□□□ -1.63
CD44-204ENST00000279452 IGKV3-20P01619 116 aa4.84□□□□□ -1.63
CD44-204ENST00000279452 RPL29P47914 159 aaKnown RBP4.84□□□□□ -1.63
CD44-204ENST00000279452 PSMB3P49720 205 aa4.84□□□□□ -1.63
CD44-204ENST00000279452 SAMD13Q5VXD3 122 aa4.84□□□□□ -1.63
CD44-204ENST00000279452 INO80EQ8NBZ0 244 aaPredicted RBP4.84□□□□□ -1.63
CD44-204ENST00000279452 OR4B1Q8NGF8 309 aa4.84□□□□□ -1.63
CD44-204ENST00000279452 ASB13Q8WXK3 278 aa4.84□□□□□ -1.63
CD44-204ENST00000279452 TM2D3Q9BRN9 247 aa4.84□□□□□ -1.63
CD44-204ENST00000279452 WDR61Q9GZS3 305 aaKnown RBP4.84□□□□□ -1.63
CD44-204ENST00000279452 TMA7Q9Y2S6 64 aaKnown RBP4.84□□□□□ -1.63
CD44-204ENST00000279452 SMLR1H3BR10 107 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 H3BTX0 84 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 DEFB1P60022 68 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 PLP1P60201 277 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 PRR20EP86478 221 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 PRR20CP86479 221 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 PRR20DP86480 221 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 PRR20BP86481 221 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 PRR20AP86496 221 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 GCSAMLQ5JQS6 135 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 FFAR4Q5NUL3 377 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 FAM78BQ5VT40 261 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 MORN5Q5VZ52 161 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 IGFL4Q6B9Z1 124 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 EBLN2Q6P2I7 272 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 PATE2Q6UY27 113 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 BPIFA4PQ86YQ2 179 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 RNF182Q8N6D2 247 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 ZNF738Q8NE65 137 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 TMEM37Q8WXS4 190 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 CSTL1Q9H114 145 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 DNAJC4Q9NNZ3 241 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 RPRMQ9NS64 109 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 NOTCH1P46531 2555 aa4.83□□□□□ -1.64
CD44-204ENST00000279452 hCG_2014768A0A024R1R8 64 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 TRAV5A0A0B4J249 113 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 KIR2DL5BA0A0G2JN68 375 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 KIR2DL5BA0A0G2JPC4 375 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 F6UB75 175 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 UBE2CO00762 179 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 ISLRO14498 428 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 ARPC5O15511 151 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 SPRY2O43597 315 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 PRB4P10163 310 aaPredicted RBP4.82□□□□□ -1.64
CD44-204ENST00000279452 LYL1P12980 280 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 NUTF2P61970 127 aaKnown RBP4.82□□□□□ -1.64
CD44-204ENST00000279452 ZNF266Q14584 549 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 Q5BKY6 102 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 LCN15Q6UWW0 184 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 LINC00322Q6ZN03 302 aaPredicted RBP4.82□□□□□ -1.64
CD44-204ENST00000279452 KIR2DL5AQ8N109 375 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 HSD17B11Q8NBQ5 300 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 KIR2DL5BQ8NHK3 375 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 GATAD1Q8WUU5 269 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 WWC2-AS2Q96NR7 200 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 PPP1R14DQ9NXH3 145 aa4.82□□□□□ -1.64
CD44-204ENST00000279452 BORCS7-ASMTA0A0B4J1R7 106 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 SOCS3O14543 225 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 OR7C2O60412 319 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 PYYP10082 97 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 SPP1P10451 314 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 HLA-DRB4P13762 266 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 HLA-DMBP28068 263 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 FXYD7P58549 80 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 HIST1H1AQ02539 215 aaPredicted RBP4.81□□□□□ -1.64
CD44-204ENST00000279452 GDF5OSQ5U4N7 250 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 SPATA31B1PQ5VZV4 182 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 MORN3Q6PF18 240 aaPredicted RBP4.81□□□□□ -1.64
CD44-204ENST00000279452 FOXI2Q6ZQN5 318 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 Q6ZWC4 215 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 MIR17HGQ75NE6 70 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 TRPT1Q86TN4 253 aaKnown RBP4.81□□□□□ -1.64
CD44-204ENST00000279452 BLNKQ8WV28 456 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 C20orf173Q96LM9 149 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 C17orf77Q96MU5 243 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 AQP10Q96PS8 301 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 SLC50A1Q9BRV3 221 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 SAV1Q9H4B6 383 aaPredicted RBP4.81□□□□□ -1.64
CD44-204ENST00000279452 WFDC1Q9HC57 220 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms